KEGG   Sulfolobus solfataricus: SSO0415Help
Entry
SSO0415           CDS       S.solfataricus                         
Gene name rpoE1
Definition DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
Orthology K03049  DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
Pathway sso00230  Purine metabolism
sso00240  Pyrimidine metabolism
sso01100  Metabolic pathways
sso03020  RNA polymerase
Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:sso00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:sso00240]
Genetic Information Processing; Transcription; RNA polymerase
[PATH:sso03020]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Pfam: RNA_pol_Rpb7_N S1 RNA_pol_Rbc25
PROSITE: S1
Motif
Other DBs NCBI-GI: 15897347
NCBI-GeneID: 1455552
IGM_Orsay: SSO0415
UniProt: Q980A3
Structure
PDB: 3HKZ 2PMZ
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Jmol
Position 361016..361558 Genome map
AA seq 180 aa AA seqDB search
MYKLIKARSIVRIPPNEFGKPLNEIALNELRQQYQEKILKDLGLVLAILNVKTSEEGILV
FGDGATYHEVEFDMITYVPVVQEVVEGEVLQVDNYGIFVNLGPMDGLVHISQITDDTLKY
DNVRGIIFGEKSKKVIQKGDKVRARVISVASTVTGRLPRIALTMRQPYLGKLEWITQTKK
NT seq 543 nt NT seq  +upstreamnt  +downstreamnt
atgtataaacttattaaagcacgtagcattgtgaggattcctccaaatgaatttggcaag
ccgttaaacgagatagctttaaacgaactaaggcagcaatatcaagaaaagatcctcaag
gatttaggtctagttttagctatattaaatgtgaaaaccagtgaggaagggatactagta
tttggcgatggcgctacttaccatgaggttgaattcgatatgataacctatgtaccagtt
gtacaagaggtagttgagggtgaggttttacaagttgacaactatggcatattcgttaat
ttaggtccaatggatggtcttgttcacatttcccaaataacagatgatacactaaaatat
gacaatgtaagaggtataatattcggagagaaatctaagaaagtgatacaaaagggtgat
aaggtaagagcaagggtaataagcgtcgcatctacggtaacaggtcggttgcctagaatt
gctttaacaatgaggcaaccctacttaggtaaactagagtggataacacagactaagaag
tga
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