KEGG T00054: SSO2094

Sulfolobus solfataricus P2: SSO2094

Entry

SSO2094 CDS T00054

Gene name

treX

Definition

glycogen debranching protein TreX (EC:3.2.1.-)

Orthology

K02438

glycogen operon protein [EC:3.2.1.-]

Organism

sso Sulfolobus solfataricus P2

Pathway

sso00500	Starch and sucrose metabolism
sso01100	Metabolic pathways
sso01110	Biosynthesis of secondary metabolites

Class

Metabolism; Carbohydrate metabolism; Starch and sucrose metabolism [PATH:sso00500]

SSDB

Motif

Pfam:

Alpha-amylase CBM_48 Alpha-amylase_C

Other DBs

NCBI-GI:

15898878

NCBI-GeneID:

1453600

UniProt:

P95868 Q7LX99

Structure

PDB:

2VUY 2VR5 2VNC

Position

1908797..1910953

AA seq 718 aa
MALFFRTRDRPLRPGDPYPLGSNWIEDDDGVNFSLFSENAEKVELLLYSLTNQKYPKEII
EVKNKTGDIWHVFVPGLRPGQLYAYRVYGPYKPELGLRFNPNKVLIDPYAKAINGSVIWN
DAVFGYKIGDQNQDLTYDERDSGEYVPKSVVINPYFEWDDEDFIKGKKVPLKDTVIYEVH
VKGFTKLRLDLPENIRGTYEGLASEQMISYLKDLGITTVELMPVFHFIDQRFLTDKGLTN
YWGYDPINFFSPECRYSSTGCLGGQVLSFKKMVNELHNAGIEVIIDVVYNHTAEGNHLGP
TLSFRGIDNTAYYMLQPDNKRYYLDFTGTGNTLNLSHPRVIQMVLDSLRYWVTEMHVDGF
RFDLAAALARELYSVNMLNTFFIALQQDPILSQVKLIAEPWDVGQGGYQVGNFPYQWAEW
NGKYRDSIRRFWRGEALPYSEIANRLLGSPDIYLGNNKTPFASINYVTSHDGFTLEDLVS
YNQKHNEANGFNNQDGMNENYSWNCGAEGPTNDQNVVICREKQKRNFMITLLVSQGTPMI
LGGDELSRTQRGNNNAFCQDNEITWFDWNLDERKSKFLEFVKKMIQFYRAHPAFRRERYF
QGKKLFGMPLKDVTFYTLEGREVDEKTWSSPTQLVIFVLEGSVMDEINMYGERIADDSFL
IILNANPNNVKVKFPKGKWELVISSYLREIKPEERIIEGEKELEIEGRTALVYRRIEL

NT seq 2157 nt +upstreamnt +downstreamnt
atggcattattcttcagaactagagataggcctcttcgtcccggagatccatatccatta
ggttcgaattggatagaagatgatgatggtgtgaatttttcattattctcagaaaatgca
gaaaaagtcgaattactcctttactcactgacaaaccaaaagtacccaaaggagataata
gaggttaaaaacaaaacgggagatatttggcacgtcttcgtcccgggactgagacccggg
caactttacgcatatagggtttatggcccatataaaccggagttgggattaaggtttaat
ccaaataaggttttaatagacccttatgctaaagccataaacggtagtgtaatttggaac
gacgcggtatttggttataagataggagatcaaaatcaagatttgacctatgacgagagg
gattccggcgaatatgttcctaaaagtgttgtgattaatccatactttgagtgggacgat
gaggatttcattaagggaaagaaagttccattaaaggatacagtaatttacgaagttcac
gtaaaagggtttacaaaacttaggttggatttgccggaaaacataaggggaacttatgaa
ggtcttgcctcagaacaaatgatcagctatctcaaagatctagggattactactgtggaa
ctaatgccagttttccattttatcgatcaaagatttctgacagataaggggctaacgaat
tactgggggtatgacccaataaatttcttctctcctgaatgtagatattccagtactggc
tgtttaggagggcaagtattaagtttcaaaaaaatggtaaacgaattacataacgcagga
attgaggttataatcgatgtagtttataatcacactgctgaggggaatcatttaggccca
acgttaagtttcagaggtattgataatacagcatattacatgctccaaccagataataaa
agatattatttagactttaccggaactggcaatacgttaaatcttagccatcctagagtc
atccagatggtcttagatagcttaagatattgggttacagagatgcacgtagatggcttt
agatttgacttagcagcagctttagccagggaattatacagcgttaatatgttaaatacg
ttcttcattgctctacagcaagacccaatattgtcacaagtaaaactgatagctgagcct
tgggatgtgggacaagggggatatcaagtagggaatttcccatatcaatgggcagagtgg
aatggaaagtatagggattcgataaggagattttggagaggagaagcgttaccctatagc
gagattgctaacagattattaggctcgccggacatttacttaggtaataataaaacacca
tttgccagtataaattacgtaacttctcatgatggtttcacattagaggatttagtcagt
tataatcaaaaacacaatgaagcgaatggatttaacaatcaagatggaatgaacgagaac
tatagttggaattgtggtgcagaaggaccaacaaatgaccaaaacgtggtaatatgcagg
gagaaacaaaaaaggaactttatgataacgttactcgttagtcaaggaacccctatgata
ttgggaggagatgagctaagcaggacacaaagaggaaataataacgcgttttgtcaagac
aacgagataacttggtttgattggaatttagatgagagaaaatcaaaatttttagagttt
gttaaaaagatgatccaattttatagggcacatccagcattcagaagggaaagatatttt
caaggaaagaaattattcggcatgccgttaaaagatgtgaccttctatactctagaaggt
agggaagttgatgagaaaacatggagttccccgacgcaactagttattttcgtgttggag
ggaagtgttatggacgagattaatatgtatggagagagaattgctgatgattccttctta
ataatacttaacgcaaatcccaataacgtaaaggtgaaattcccaaaaggtaaatgggaa
ctagttatcagttcttatttgagagaaataaaaccagaagagagaatcatagaaggtgag
aaggaactggaaatagagggaaggacggcattagtttataggaggatagaattatga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
3D Structure (3)   
   PDB (3)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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