KEGG   Sulfolobus solfataricus: SSO3254Help
Entry
SSO3254           CDS       S.solfataricus                         
Gene name rpoB2
Definition DNA-directed RNA polymerase subunit beta'' (EC:2.7.7.6)
Orthology K03045  DNA-directed RNA polymerase subunit B" [EC:2.7.7.6]
Pathway sso00230  Purine metabolism
sso00240  Pyrimidine metabolism
sso01100  Metabolic pathways
sso03020  RNA polymerase
Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:sso00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:sso00240]
Genetic Information Processing; Transcription; RNA polymerase
[PATH:sso03020]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Pfam: RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3
Motif
Other DBs NCBI-GI: 15897173
NCBI-GeneID: 1455378
IGM_Orsay: SSO3254
UniProt: Q980R0
Position complement(195129..196571) Genome map
AA seq 480 aa AA seqDB search
MASNLTIDERWRVIEAYFKSKGLVRQHLDSYNDFVRNKLQEIIDEQGEIPTEIPGLKVRL
GKIRIGKPRVRESDRGEREISPMEARLRNLTYAAPLWLTMIPVENNIEAEPEEVYIGDLP
IMLKSAIDPISQYTLDKLIEIGEDPKDPGGYFIVNGSERVIVTQEDLAPNRVLVDTGKTG
SNITHTAKIISSTAGYRVPVTIERLKDGTFHVSFPAVPGKIPFVILMRALGILTDRDIVY
AVSLDPEVQNELFPSLEQASSIANVDDALDFIGSRVAIGQKRENRIEKAQQIIDKYFLPH
LGTSAEDRKKKAYYLAYAISKVIELYLGRREPDDKDHYANKRLRLAGDLFASLFRVAFKA
FVKDLTYQLEKSKVRGRKLALKALVRPDIVTERIRHALATGNWVGGRTGVSQLLDRTNWL
SMLSHLRRVISSLARGQPNFEARDLHGTQWGRMCPFETPEGPNSGLVKNLAVNGSNCCTE
NT seq 1443 nt NT seq  +upstreamnt  +downstreamnt
ttggcatctaatttaaccattgatgaaagatggagagtcatcgaagcgtactttaaatcc
aaaggcttagttagacagcatctggattcatacaatgactttgttagaaataagcttcaa
gaaattattgacgaacaaggagaaatacccacagaaataccaggtttgaaagtgagatta
ggcaagataaggataggaaaaccaagagtccgggaatcggatagaggagaaagagaaatc
agtcccatggaagctcgattaaggaacttaacttatgccgctccactatggcttacaatg
atcccagttgaaaataatattgaagcagaaccagaagaggtttatataggcgacctgcct
ataatgcttaaatcagccatagacccaatatcacagtatactctagataagctaattgag
ataggtgaagatcctaaagacccaggagggtatttcatagtaaatggatctgaaagagtt
atagtaactcaagaagatttggctccaaatagagttcttgtagatactggaaagacagga
tcaaacattacgcatacagcgaaaattatctcgagtactgcgggctatagagtgcctgtg
acaatagaaagattaaaagatggtacatttcatgtatcttttccagcagttcccggtaag
attccgtttgttattctaatgagggcactgggtatattaaccgatagagatatagtttat
gcggtatcattagatcctgaggttcagaatgaattatttccttctctagagcaagcaagt
tcgatagccaacgttgatgatgcactagattttataggtagtagagtagctataggccaa
aagagagaaaacagaatagaaaaagcacagcagataattgataaatatttcctaccccat
ttaggcacttcagcagaagatagaaagaagaaagcgtattatttagcttacgctatatca
aaagtaattgaattatatcttggtagaagggaacccgacgataaagatcattacgctaac
aaaagattaagattagctggagatttgtttgcatcattatttagagtagctttcaaagct
ttcgtaaaagatttaacatatcaattagagaaatctaaggtaagaggtaggaaactcgct
ttaaaggcattagttagaccagatattgttacagaaagaataaggcatgcattagctact
gggaactgggttggtggaagaactggagttagccaattacttgataggaccaactggctt
tctatgttaagccatctgaggagagtaatatcctcactagcaaggggtcaacctaatttc
gaagccagagatttacatggtacgcaatggggtaggatgtgtccctttgaaacaccagaa
ggtccaaatagtggactagttaagaatctagccgttaatggctcaaattgctgtacggaa
taa
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