KEGG   Saccharolobus solfataricus SARC-C: SULC_1311
Entry
SULC_1311         CDS       T03912                                 
Name
(GenBank) S1 RNA-binding domain-containing protein
  KO
K07573  exosome complex component CSL4
Organism
ssof  Saccharolobus solfataricus SARC-C
Pathway
ssof03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ssof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SULC_1311
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssof03019]
    SULC_1311
Messenger RNA biogenesis [BR:ssof03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     SULC_1311
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     SULC_1311
SSDB
Motif
Pfam: ECR1_N S1 OrfB_Zn_ribbon Mu-like_Com DUF3977 HypA C1_1
Other DBs
NCBI-ProteinID: AKA76305
UniProt: A0A0E3MD77
Position
complement(1235466..1236035)
AA seq 189 aa
MRTQGELTLPGEELAVIEEFMTGDGTYEQNGIVRAAVVGKIFYDMLNRKSNVLGFKKIIF
QHLKKAKYVIGIVNSIKEDSALVSIVGIEERGLASPISAYLHISQISNKKINNVTDAIKI
GDVIKAKLLSYTFPLALTIKMKDLGVIYARCSRCGYLLIKQDENNLKCQRCGNIEQRKIG
SYMVKKGGN
NT seq 570 nt   +upstreamnt  +downstreamnt
gtgagaactcaaggcgaattaactttaccaggagaggagttagcagtaattgaagaattt
atgactggcgatggtacgtatgaacaaaatggtatagttagagccgcagttgtaggaaag
atcttttatgatatgctaaataggaagagtaacgtactaggatttaagaaaattatattt
caacatttgaagaaggctaaatatgtgattggcattgttaattctatcaaagaagactca
gcactagtttcaatagtagggatcgaggagagaggtcttgcgtcaccaatttcagcttac
ttacatatttctcaaataagtaataaaaaaattaataatgtaacagatgctataaaaatc
ggagatgtaattaaagctaaattactttcatacacttttcccttggctttgaccattaaa
atgaaagatcttggtgttatttacgctagatgctcaagatgtggatatttattgattaag
caagacgaaaataatttaaaatgtcagagatgcggaaatattgaacaacgaaaaatagga
tcttatatggtgaagaaaggtggaaattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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