KEGG   Streptococcus suis D9 (serotype 7): SSUD9_0441
Entry
SSUD9_0441        CDS       T02022                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
ssq  Streptococcus suis D9 (serotype 7)
Pathway
ssq03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ssq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SSUD9_0441
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssq03021]
    SSUD9_0441
   03400 DNA repair and recombination proteins [BR:ssq03400]
    SSUD9_0441
Enzymes [BR:ssq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SSUD9_0441
Transcription machinery [BR:ssq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SSUD9_0441
DNA repair and recombination proteins [BR:ssq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SSUD9_0441
SSDB
Motif
Pfam: RNA_pol_Rpb6 TP_methylase
Other DBs
NCBI-ProteinID: AER16690
Position
422769..423083
AA seq 104 aa
MMLKPSIDTLLDKVPSKYSLVILEAKRAHELEAGAKPTQEFTSVKSTLRALEEIESGNVV
IHPDPEAKREAVRRRAEEAKRLAEEEERKIKAQIAKEKEEGEKI
NT seq 315 nt   +upstreamnt  +downstreamnt
atgatgttgaagccgtcaattgataccttgttggataaggtaccatctaagtattctttg
gttattcttgaggctaagcgtgcccatgaattggaagcaggtgccaaaccaactcaagaa
ttcacctcagtgaaatccaccctacgcgccttggaagaaattgaatcaggtaatgtagtc
attcacccagacccagaagcgaaacgtgaggctgttcgtcgccgtgccgaagaggctaaa
cgtttggcggaagaagaagagcgtaaaatcaaagctcaaattgctaaagaaaaagaagaa
ggcgaaaagatttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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