KEGG   Streptococcus salivarius CCHSS3: SALIVB_1902
Entry
SALIVB_1902       CDS       T01580                                 
Symbol
recD
Name
(GenBank) putative exodeoxyribonuclease V (Alpha subunit) (Exodeoxyribonuclease V alpha chain)
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
ssr  Streptococcus salivarius CCHSS3
Pathway
ssr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ssr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SALIVB_1902 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssr03400]
    SALIVB_1902 (recD)
Enzymes [BR:ssr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     SALIVB_1902 (recD)
DNA repair and recombination proteins [BR:ssr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SALIVB_1902 (recD)
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 UvrD_C_2 SH3_13 Viral_helicase1 AAA_11 AAA_22 HHH_5 AAA AAA_12 DEAD nSTAND3 UvrD_C UvrD-helicase PIF1 RsgA_GTPase AAA_16 Herpes_Helicase AAA_14 AAA_28 T2SSE AAA_17 HHH NTPase_1 SLFN-g3_helicase TsaE
Other DBs
NCBI-ProteinID: CCB94155
Position
1985893..1988397
AA seq 834 aa
MQEFYFSGTIERVIFENTSNFFRILLLEIDETDSDFEDYEIIVTGTMGDVMEGEDYTFWG
QLTNHPKYGEQLQMTRYERSKPSASGLIKYFASDNFKGIGKKTAERIVEIYGEDPIDKIL
EDPSELEQIPNLSKVNREAFVAKLKINYGAEQILSKLSSYGLTPKAASQIFNQYKEESLN
LIEEHPYLLVEEIQGIGFKMADQLAERLGIASDAPERLRAALIHCLLEASMEEGDTYIEA
KALLERTIILLESARPIELDPALVANQLTNLIQEDKVQNVETKIFDNTLYFAEQGIYTHL
TRIMKDQPDVSSEDKILDSLEGVEEELGITYDQVQKDAIIKALQSKVFILTGGPGTGKTT
VINGIIKTYADLHGLDFKKSDLPIILAAPTGRAARRMNELTQLPSATIHRHLGLNSEDDF
KTLEDYLDCDLIIIDEFSMVDTWLANQLFESISDSTQVIIVGDQDQLPSVGPGQVLADLL
QIDNLPKVSLTKIFRQSEDSTIVTLASRMRQGQLPADFTEKKADRSYFEANANHIPQMVP
KIVSAAIKSGIAAQDVQILAPMYRGQAGINNLNTIMQDLLNPQEKANQFAFNDIFFRKND
KILHLVNDTELNVFNGDIGIITDLIPGKYTESKQDEIYMSFDGNEVIYPRNEWNKITLAY
AMSIHKSQGSEFPVVILPITRQSGRMLQRNLIYTAITRAKSKLVMLGEIAAFDYAVRNEG
AKRNTYLIQRFEQTYTQAVDKSVEKIVKNKATDASNQTKTKNNDPSETLENKAFSENINP
SPDLVNTYSQPVDKSVNKPVQTEENYRLTEENWATIDPMIGLSEDDIAAFFNNN
NT seq 2505 nt   +upstreamnt  +downstreamnt
atgcaagaattttatttttcaggaactatcgaacgcgtcattttcgaaaacactagtaat
ttttttcgtatcttactcttagagattgacgaaacggacagtgattttgaagactacgaa
atcattgtcacaggaactatgggggatgtcatggagggtgaagactataccttctggggc
caactaaccaatcaccctaaatatggggaacagctacaaatgacccgctacgagcgttca
aaaccttctgccagcggtcttatcaaatattttgccagcgacaatttcaaaggaatcggt
aagaaaacggccgagcgtattgtcgaaatttacggagaagaccctattgacaagattctc
gaggatcctagcgagttagagcagattcccaacctatccaaggtcaatcgagaagccttt
gttgctaagttaaaaatcaattatggagccgagcaaatcctgtccaaactttctagctat
ggcctcacaccaaaggccgcctcacaaattttcaaccaatataaggaagagtcactaaat
cttattgaggaacacccttatctattagtagaggagattcaaggaatcggttttaaaatg
gccgaccaactagctgaacgtcttggaattgctagtgatgcccctgagcgtttacgagca
gccttgattcattgtctactagaagccagtatggaagaaggcgatacctacatagaagcc
aaagccttgcttgaacggaccatcattcttttggaaagtgctcgtccgattgaacttgac
cccgccttggtcgctaaccaattaaccaatcttatccaagaggataaggtgcaaaatgta
gagactaaaatctttgataataccctatattttgcggaacagggcatctatacccaccta
actcgtatcatgaaggaccaacctgatgtcagctctgaagacaaaatattagacagcctt
gaaggggtggaagaggagcttggtattacttatgatcaggttcaaaaagatgccattatc
aaagccctacaaagcaaggtcttcatcctgacaggtggtcccggaacagggaaaaccact
gttattaacggcattattaaaacctatgctgaccttcatggtctagatttcaaaaagtct
gatttgcctattattttagcggcgccaacgggacgggctgctcgtcgaatgaacgaactc
acccaactccctagcgccactatccatagacatttgggcctcaatagcgaggacgatttc
aagaccttagaggactatctcgattgcgacttgattatcatcgatgagttttctatggtt
gatacttggttggctaatcaactttttgaaagtatctctgattcaacccaagtcatcatt
gtgggtgaccaagaccaactgccttccgtaggccctggccaagtcttggctgaccttttg
cagattgataacttgccaaaggtttccctaaccaaaattttcagacaatccgaggactcc
accatcgttaccctggctagtcggatgcgccaaggccaactacccgctgatttcacagag
aaaaaggctgaccgctcttactttgaggccaatgccaaccatattccacagatggttcct
aaaattgtctctgccgctataaagagcgggatcgctgctcaggatgtgcagattctagct
cccatgtatcgaggacaggctggtattaacaatctcaataccattatgcaggacctactt
aatcctcaagaaaaggccaatcagtttgcctttaatgatattttcttccgtaagaacgac
aaaattctccatctggtcaacgataccgaactcaatgtcttcaatggcgacatcggcatc
attaccgatctcatccctggtaaatatactgaaagcaagcaggacgaaatttacatgtcc
tttgatggcaatgaggttatctatcctcgtaacgaatggaataagattactctggcctat
gccatgtcaatccacaaatctcaagggagtgagttcccagtcgttatccttcccatcaca
cgacaaagtggacgtatgctacaacgtaacctcatctacaccgctatcacacgcgccaag
agtaaactagtcatgttaggggaaatcgcagcctttgattatgccgttcgcaacgaagga
gctaaacgaaatacttatctcatccaacgttttgaacaaacttatacacaagctgttgat
aagtctgtcgaaaagattgttaaaaacaaggcaacagacgcctccaatcaaacaaaaacg
aaaaacaacgacccctcagaaacccttgaaaacaaagccttttcggaaaatatcaatcca
tccccagatcttgttaacacttattcacaacctgtggataagtctgttaacaaacctgtg
caaacagaagaaaactatcgtttaactgaagaaaattgggcaactatagatccaatgatt
ggtctcagtgaagacgatattgctgccttttttaacaataactaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (27)   
   Pfam (27)   
All databases (36)   

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