KEGG   Streptococcus suis SC84 (serotype 2): SSUSC84_0839
Entry
SSUSC84_0839      CDS       T00937                                 
Name
(GenBank) DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
sss  Streptococcus suis SC84 (serotype 2)
Pathway
sss03420  Nucleotide excision repair
sss03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sss00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SSUSC84_0839
   03430 Mismatch repair
    SSUSC84_0839
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sss03400]
    SSUSC84_0839
Enzymes [BR:sss01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SSUSC84_0839
DNA repair and recombination proteins [BR:sss03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SSUSC84_0839
   MMR (mismatch excision repair)
    Other MMR factors
     SSUSC84_0839
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 Viral_helicase1 UvrD_C_2 PhoH AAA_30
Other DBs
NCBI-ProteinID: CAZ51618
Position
complement(906446..908263)
AA seq 605 aa
MVKSDDWFPKGVIKLEDAALEVVKDVTNSLVIAGPGAGKTELLAQKLDYLFSTNKCISPK
KILALSFKTDAAANLKDRVKKRYGDEYASRFTSLTYSAFEKRILDQFRDVLPEDIRPSRD
YLIEDWDTIKELLSMNGINVNGWRMSDIRNFVENIILNDGNTHKLKKDLLKGTQDNKPVL
LYRQITKLSTQIIATNEYIRKALQMTYDFVFLDEFQDTTYAQYNLLKTCFLGSSCKLTAV
GDNKQAIMRWAGAKPDIFPDYIRDFNSNEYQLLMNHRSVPKLVKFQKEVHQILNSNHSSI
QPNNYPEFQEGEITLFEFENESLEAELIANDIESKIQGGIRPSEICILAKQKVDDYSSKL
ITTLNSKGIKARIENEYQELLKDPTCNLLLDLISCSQGKRDPLIWENISNFYGNINGIDE
FTDELILAKSYKEIDNIVSDITYLISNFIPNEESMLNLIDCIIEKIDEKRIISNFSTYNG
KSDLDIIVKNFSMLLYKEYSQTQGEWLDIVSSFKGENSISIMTIHKSKGLEYEAVYFLGL
EDSAFWNFNNQPEEDKSAFFVALSRAKSHLIFTYCKLRNNRAQNNRNINEIYSLLTQSKL
VKVGN
NT seq 1818 nt   +upstreamnt  +downstreamnt
atggtgaagagtgacgattggtttcctaaaggagtcattaaattagaggatgctgcttta
gaagtagttaaagatgttactaacagtctagtcattgctggaccaggtgctggaaaaaca
gaattactggctcaaaagttagactatcttttttctacaaataaatgtatttctccaaaa
aagattttagctttaagttttaaaacagatgctgctgcaaatttgaaagatagagttaaa
aaacgttatggtgatgaatatgcttctcgttttacctcattaacctattcggcttttgaa
aagagaattttagaccaatttagagatgttctacctgaggatatacgaccatcaagagat
tatttgattgaagattgggatactataaaagaactactctctatgaatggaattaatgtt
aatggatggaggatgtcagatataagaaattttgtcgaaaatattatacttaatgacggg
aatactcacaaattaaaaaaggatttactaaaaggaacacaagataataagccggtcctc
ttgtataggcaaataacaaagttgagtactcaaataatagctactaacgaatacatccgt
aaagcacttcaaatgacatacgattttgtatttctagatgaatttcaggatactacatat
gcccagtataatttattaaaaacttgttttttaggttcgtcttgtaaattaacagcagtt
ggagataataagcaagccattatgagatgggcaggtgcaaaacctgatatttttccagac
tatattcgagactttaattcaaatgaatatcaattgttgatgaatcaccgctctgtacct
aaacttgtaaaatttcaaaaagaggttcatcagatattaaatagtaatcacagttctatt
cagccaaataattatccagaatttcaagagggtgaaataacattatttgaatttgaaaat
gaaagtttagaagctgagttaattgcaaatgatatagaatcaaaaattcaaggaggtata
cgaccatcagaaatctgtatcctagcaaaacagaaggttgatgattatagttcaaaattg
ataactacattaaacagtaaagggattaaagcaagaattgaaaatgaatatcaagagctt
ttaaaagaccctacttgtaacctattattagatttaatatcatgcagtcaaggaaaacga
gatcctttaatttgggaaaatattagtaatttttatggaaatatcaatggaatagatgag
tttactgatgaattaattttagcaaaatcctataaggagattgacaatatagttagtgat
attacttacctaatttcaaattttattcccaatgaagaaagtatgctaaatttaattgat
tgtattattgaaaaaatagatgaaaaaagaattatttccaacttttcaacatacaatgga
aaaagtgacctagatatcattgtcaagaatttttcaatgttattatacaaagaatattct
caaacacaaggtgaatggctagatatagtatctagtttcaagggtgaaaactcaatttca
attatgactatccataagagtaaaggattagaatatgaggcagtctattttctaggcttg
gaggattctgcattctggaattttaataatcaacctgaagaagataaaagtgcgttcttc
gttgcactttcacgagcaaaaagtcacctaatcttcacatactgtaaattgagaaataat
agggcacaaaacaatagaaatattaatgagatatattcattgctaacccagtctaaacta
gtaaaggttggtaattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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