KEGG T00515: SSU98

Streptococcus suis 98HAH33: SSU98_0222

Entry

SSU98_0222 CDS T00515

Definition

exonuclease V subunit alpha

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

ssv Streptococcus suis 98HAH33

Pathway

ssv03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:ssv03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 Viral_helicase1 AAA_11 HHH_5 AAA_12 DUF2075 UvrD_C Herpes_Helicase T2SE AAA_22 UvrD-helicase AAA_28 AAA_23 Helicase_RecD AAA_29 NTPase_1 HHH AAA

Other DBs

NCBI-GI:

146320069

NCBI-GeneID:

5101672

UniProt:

A4VZ41

Position

complement(210844..213411)

AA seq 855 aa
MEVRGTLFGLCEFFPTPFSLLLEINSMNEVYFTGTIDRIIFENPSNFYKILLLEIEETDA
DYDDYEIIVTGTIADVIEGEDYRFYGNLVTHPKYGQQLQISRYERSKPTSAGLVKYFSSE
HFKGIGRKTAEKIVELYGEDTIDKILAEPEKLTQITGLSSKNMQAFVEKLRLNYGTELIL
AKLAEYGIPNKLAFQIQDQYKEKTLQIIEENPYQLVEDVQGLGFTIADRIAENLGIASDS
PQRFRAGMLFSLIHRSMETGDTYVEARDLLEATLELLEKSRHTELDPAAVAKELTGLIAD
DKVQQEGTKIFDNSLYFAEHGIHTNLTRLMGKNGFKPFPRADVEAAIAELESISSLTYDN
IQKEAIVQAITNPLFILTGGPGTGKTTVINGIIAVYAILHKIDLTRNREECPVLLAAPTG
RATRRMNELTGLPSATIHRHLGLVEGQEESYRDDYLDADFIIVDEFSMVDTWLANQLFQN
ISSQTQVLIVGDAEQLPSVSPGQVLADLLKIDKLPSITLERIYRQSDDSTIVTLASQIRQ
GALPSDFREKKADRSYFEAQNEQIPALIERIVGAAIKSGIPANEVQILAPMYRGAAGIDQ
LNTMTQALLNPLEEGELEFLHNEQAFRQGDRVIHLVNDAEANVFNGDLGYITDLLPAKYT
DSKQDEITINFDGSEVTYPRNEWYKITLAYAMSIHKSQGSEFQVVILPITRTSHRMLQRN
LVYTAITRSKSKLILLGEISAFDYAVKNAGTVRKTYLVPRFQGEMAEQESKESLIKKDES
KTATTTQTQPPTQPDRKEQVKVVKENNQQLSLLDQDQPEKTSPQPTEYILTVDNLLTIDP
MIGIEQADIEEFFKA

NT seq 2568 nt +upstreamnt +downstreamnt
ttggaagtgaggggaactctttttggtctatgcgagttcttccccactcccttttcatta
ttattggaaataaactctatgaacgaagtgtattttaccggtactattgaccggattatt
tttgaaaatcctagtaatttttataaaatccttctccttgaaatcgaggagacagacgca
gactatgatgactacgaaattattgtgaccggaacgattgccgatgtcattgaaggagaa
gactatcgtttctatggcaatctggtcacccatcccaagtatggtcagcagctgcaaatt
tcgcgttacgaacgcagcaagcctacctcagctggtctggtcaagtatttctccagcgag
catttcaagggaattggacgcaaaacagctgaaaaaatcgttgagctctatggcgaagat
accattgataagattttagctgaacctgaaaaactaacccaaatcacaggcctatccagc
aagaacatgcaggcatttgtcgaaaaactccgcctcaattatggaaccgagttgatcttg
gcaaaactagccgagtatggcattcccaataaattggcctttcaaatccaagaccagtat
aaggaaaaaacacttcagattattgaagaaaatccctatcaactggtcgaagatgtccag
gggctcggctttaccattgccgataggattgcggaaaatctaggaattgccagtgattca
ccccaacgttttcgggctggcatgctctttagtctcattcatcgctccatggaaacaggc
gatacctatgtggaggccagagacttgctggaagcaacccttgaactgctggaaaaatcc
cgccatacagagctggaccccgctgctgttgccaaagaattgacgggactgattgcagac
gacaaggtacagcaagaaggcacaaagatttttgacaacagcctctactttgccgaacat
ggtatccatacaaacctaactcgcctgatgggaaaaaacggcttcaagcccttcccacgc
gcagacgtcgaggctgccatagcagagctggaaagcatatcttctctcacctacgataac
attcaaaaagaagccattgtccaagccattaccaatccgcttttcattctgacaggcggg
ccagggactggaaaaacaacggttatcaacggcattatcgcagtctatgctatcttgcat
aagattgacctgacgcgaaaccgagaagaatgcccagtcctcctagccgctccaactgga
cgagcaaccagacggatgaatgaattgacagggctgccttccgccaccatccaccgccat
ctcggtctggtagaaggacaggaggaatcctaccgtgatgattatttggatgccgacttt
atcatcgtggatgagttttctatggtagatacttggttggcaaaccagctcttccagaat
atctcctcccagacccaagttctgattgtcggcgatgccgagcaattgccttctgtcagc
cccggtcaagtacttgctgacctcttgaaaattgacaagctgcccagcattactctagaa
cgtatctatcgtcaatccgatgattcgaccattgttaccctagccagccagattcgacag
ggtgctctgcctagcgattttcgtgagaaaaaggctgaccgttcctattttgaagcccag
aatgaacaaattccagccctgattgagcgcattgtcggcgcagccatcaagtcaggtatt
cctgcaaacgaggtacagatcctcgctcccatgtaccgtggggccgcaggcatcgaccaa
ctcaacactatgacccaggccctgctcaatccactggaagagggagagttagaattcctg
cataacgagcaagccttccgccaaggcgaccgggtcattcatttagtcaacgatgccgag
gccaatgtcttcaatggtgatttaggctacatcaccgacctccttcctgccaagtacacc
gactccaagcaggacgaaattaccatcaacttcgacggtagcgaggtcacctatccccga
aacgaatggtacaagattaccctggcctatgccatgtccatccacaagtcccaaggcagc
gagtttcaggtagtcatcctccccatcacccgcaccagccaccgtatgctccagcgcaat
ctggtctacaccgccatcacccgctccaagagcaagctcatcctcctgggcgaaatctcc
gccttcgactacgccgtcaaaaacgccggcaccgtccgaaaaacctatctggtcccacgt
ttccaaggggaaatggcagagcaggaaagcaaggaaagcctgattaaaaaagacgaaagc
aaaacagctacaaccacgcaaacccagccccctactcagccagacagaaaagaacaggtt
aaagtagtcaaagaaaacaaccaacaactctcccttcttgatcaagaccagccagaaaaa
acaagtccccaacccacagaatacattttgactgtagacaacctactaaccatcgacccc
atgattggcatagaacaggcagatattgaagaattttttaaagcataa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (21)   
   Pfam (21)   
All databases (30)   

Download RDF

DBGET integrated database retrieval system