KEGG   Streptomyces sp. SirexAA-E: SACTE_2048
Entry
SACTE_2048        CDS       T01601                                 
Name
(GenBank) DNA glycosylase/AP lyase, H2TH DNA-binding protein
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
ssx  Streptomyces sp. SirexAA-E
Pathway
ssx03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ssx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SACTE_2048
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssx03400]
    SACTE_2048
Enzymes [BR:ssx01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SACTE_2048
DNA repair and recombination proteins [BR:ssx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SACTE_2048
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS NFACT_N DprA_WH
Other DBs
NCBI-ProteinID: AEN09950
UniProt: G2NHG6
Position
complement(2275775..2276584)
AA seq 269 aa
MPEGHTIHRLAADHRARFAGSPVRVSSPQRKFAESAARLDGRVLTDTDAHGKHLFLGFDG
PEWVHIHLGLFGKLGFGTTPAPPPTDTVRLRLVNASDYADLRGPTTCALITEDEKRAIHA
RLGPDPLREDEDGERAWLRISRSRVTVAALLMDQKVVAGVGNVYRAEVLFRHGIDPYRPG
KDLTRSEWDAIWADLGALMREGVRNNRIDTVRPEHLPEAMGRPARVDDHGGEVYVYRRAR
QACHICATEIRTADLAARNLFWCPACQRR
NT seq 810 nt   +upstreamnt  +downstreamnt
gtgcccgaggggcatacgatccaccgcctggccgcggaccaccgcgcacggttcgcgggt
tccccggtccgcgtgagcagcccgcagcggaagttcgccgagagcgccgcccggctcgac
ggccgggtcctcacggacaccgacgcccacggcaagcacctcttcctgggcttcgacggg
cccgagtgggtccacatccacctcgggctcttcggcaagctcggcttcggcaccaccccg
gcgccgccgcccaccgacacggtccggctgcgcctggtcaacgcctccgactacgccgac
ctgcgcggccccaccacctgcgccctgatcacggaggacgagaagcgcgcgatacacgcc
cggctcggcccggacccgctgcgcgaggacgaggacggcgagcgggcgtggctgcggatc
tcccggagccgggtcaccgtggccgccctgctgatggaccagaaggtcgtggcgggcgtc
ggcaacgtctaccgcgcggaggtcctcttccggcacggcatcgacccgtaccgcccgggc
aaggacctcaccaggagcgagtgggacgccatctgggcggacctcggcgcactgatgcgt
gagggcgtccgcaacaaccgcatcgacaccgtccgccccgagcacctgcccgaggcgatg
ggccgcccggcgcgcgtcgacgaccacggcggcgaggtctacgtctaccgccgggcccgg
caggcctgccacatctgcgccaccgagatccgaacggccgacctcgccgcccgcaacctc
ttctggtgcccggcctgccagcgccgctga

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