KEGG   Streptomyces sp. SirexAA-E: SACTE_4794Help
Entry
SACTE_4794        CDS       T01601                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ssx  Streptomyces sp. SirexAA-E
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ssx00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    SACTE_4794
Enzymes [BR:ssx01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     SACTE_4794
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SACTE_4794
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
5310905..5311762
Genome map
AA seq 285 aa AA seqDB search
MPELPEVEVVRRGLERWVSGRTVEDVDVLHPRAVRRHIAGGPDFAARLRGLRFGTAMRRG
KYLWIPLDEVSASLLGHLGMSGQLLVQPSEAPDEKHLRIRVRFADDLGTELRFVDQRTFG
GLSLHDNTPDGLPDVIAHIARDPLDPAFDDAAFHTALRLRRTTVKRALLDQSLISGVGNI
YADEALWRSRLHYERPTATLTRPRTAELLGHVRDVMREALAQGGTSFDSLYVNVNGQSGY
FDRSLDAYGREDEPCHRCGTPMRRRPWMNRSSYYCPRCQRPPRPA
NT seq 858 nt NT seq  +upstreamnt  +downstreamnt
gtgcccgaactgcccgaggtcgaagtcgtacggagagggctggagcgctgggtctccggg
cgcaccgtcgaggacgtggacgtcctgcacccgcgtgccgtccgccggcacatcgcgggc
ggccccgacttcgcggcccggctgcgggggctgcgcttcgggaccgcgatgcggcgcggc
aagtacctgtggatcccgctggacgaggtgtccgcctcgctgctcggccacctcggcatg
agcggccagctgctcgtccagccgtccgaggcgccggacgagaagcacctgcgcatccgg
gtccgtttcgccgacgacctcggcacggagctgcgcttcgtcgaccagcggaccttcggg
ggcctctcgctccacgacaacaccccggacgggctgcccgacgtcatcgcgcacatcgcc
cgcgacccgctggaccccgccttcgacgacgccgccttccacaccgcgctgcggctgcgg
cgtacgacggtcaagcgcgcactgctcgaccagtccctgatcagcggcgtcggcaacatc
tacgccgacgaggcgctctggcgcagcaggctgcactacgagcggccgaccgcgaccctc
acccggccgaggacggcggagctgctgggccacgtccgggacgtgatgcgcgaggccctg
gcccagggcggcaccagcttcgacagcctgtacgtcaacgtgaacggccagtccggctac
ttcgaccgctcactggacgcgtacggacgcgaggacgagccctgccaccgctgcgggacg
ccgatgcggcgccggccgtggatgaaccgctccagctactactgcccgcgctgccagcgc
ccgccgcgccccgcctga

DBGET integrated database retrieval system