KEGG   Streptomyces sp. SirexAA-E: SACTE_4983
Entry
SACTE_4983        CDS       T01601                                 
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
ssx  Streptomyces sp. SirexAA-E
Pathway
ssx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ssx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SACTE_4983
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssx03019]
    SACTE_4983
   03400 DNA repair and recombination proteins [BR:ssx03400]
    SACTE_4983
Enzymes [BR:ssx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SACTE_4983
Messenger RNA biogenesis [BR:ssx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SACTE_4983
DNA repair and recombination proteins [BR:ssx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SACTE_4983
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_30 RecQ_Zn_bind Pribosyltran AAA_22 HTH_IclR MarR_2
Other DBs
NCBI-ProteinID: AEN12808
UniProt: G2NPS4
Position
5542092..5544314
AA seq 740 aa
MSRLSRGVKSSIVGAIGLHGGMDNLELRTEADAILAELVGDPGGKARLREDQWQAVAALV
QERRRALVVQRTGWGKSAVYFVATALLRRRGAGPTVIISPLLALMRNQVESAARAGIQAR
TINSANPEEWDTIYGEVERGETDVLLVSPERLNSVDFRDQVLPKLAATTGLLVVDEAHCI
SDWGHDFRPDYRRLRAMLAELPAGVPVLATTATANARVTADVAEQLGTGAGEALVLRGPL
ERESLRLGVVRLPDAAHRLAWLAEHLDELPGSGIVYTLTVAAAEEATAFLRQRGFRVASY
TGKTENADRLQAEVDLRENRVKALVATSALGMGYDKPDLGFVVHLGSPSSPIAYYQQVGR
AGRGVAHADVLLLPGKEDEAIWRYFADTAFPPEAQVRQTLAALAEAGRPLSVPALEAAVD
LRRSRLESMLKVLDVDGAVRRVKGGWAATGAEWIYEGERYAWVARQRAAEQQAMRDYAST
TGCRMEFLRRQLDDEGAAPCGRCDNCAGPWADPSVSAETLTGATKELDRPGVEVEPRRMW
PTGMPALGIDLKGRIPVKEQCSTGRALGRLSDIGWGNRLRPLLADNAPDGPVPDDVLDAA
VAVLADWARSAGGWASGAADASARPVGVVAVPSLTRPHLVGTLAQGIASVGRLPYLGALT
YTGPDGAHAARRSNSAQRLKALSGAFAVPEELSGALARTPGPVLLVDDLTDSGWTLAVAA
RLLRQAGAEQVLPLVLAAAG
NT seq 2223 nt   +upstreamnt  +downstreamnt
ttgagtcggttgtcacgcggggtgaagtcgtcgattgtcggtgccatcgggttgcatggg
ggcatggacaacctggagctccgaaccgaagccgacgccatcctcgccgagctcgtcggt
gacccgggaggaaaggctcggctgcgcgaggaccagtggcaggcggtggccgccctggtg
caggagcgccggcgcgctttggtggtgcagcgcaccggctgggggaagtcggcggtgtac
ttcgtcgccaccgctctgctgcgccggaggggtgcgggcccgacggtgatcatctcgccg
ctgctggcgctgatgcgcaaccaggtcgagtcggcggcgcgggccggtatccaggcgcgc
accatcaactcggccaacccggaggagtgggacaccatctacggggaggtcgagcgcggc
gagaccgacgtgctcctcgtcagtcccgaacgcctcaactccgtcgatttccgtgaccag
gtactgcccaagctcgcggcgacgacgggtctgctggtggtggacgaggcgcactgcatt
tccgactggggacatgacttccgccccgactaccggcggctgcgcgcgatgctggccgag
cttcccgccggtgtgccggtgctggccacgacggcgaccgccaacgcccgggtcaccgcg
gacgtggccgagcagctgggtacgggcgccggggaggcactggtgctgcgcgggccgctg
gagagggagagcctgcgcctgggtgtggtgcgactgccggacgccgcgcaccgcctggcc
tggctcgccgaacacctcgacgagctgccgggatcgggcatcgtgtacaccctcaccgtc
gcagcggccgaggaggccaccgccttcctgcggcagcggggcttccgggtggcctcgtac
accgggaagacggagaacgccgaccggttgcaggccgaggtcgacctgcgggagaaccgg
gtcaaggccctggtggcgacatcggcgctgggcatgggatacgacaagccggacctggga
ttcgtggtgcacctgggctcgccgtcctcgccgatcgcctactaccagcaggtggggcgt
gcggggcgcggtgtggcccatgccgatgtactcctgctgcccggcaaggaggacgaggcc
atctggcgctacttcgccgataccgcgttcccgcccgaggcacaggtcaggcagacgctc
gcggcgctggccgaggcgggacgcccgctgtcggttccggccctggaggcggcggtggat
cttcggcgcagccggctggagtcgatgctgaaggtgctcgacgtcgatggcgccgtcagg
cgggtgaagggcggttgggcggccacgggagccgagtggatctacgagggcgagcgctac
gcgtgggtggcccggcagcgggccgccgaacagcaggccatgcgcgactacgcgagcacg
accgggtgccggatggaattcctgcgccgccagctggacgacgagggcgcggccccgtgc
ggccgttgcgacaactgcgcggggccgtgggcggatccctccgtctcggcggagacgctg
acgggcgcgacgaaggagctggaccgccccggggtggaggtcgagccgcgccgcatgtgg
cctactggcatgcccgccctgggcatcgacctcaaggggcgtattccggtcaaggagcag
tgctccaccggacgtgcgctgggacggctctcggacatcggctggggcaaccggctgcgc
ccgctgctggccgacaacgcaccggacgggccggtccccgacgacgtcctggacgccgcc
gtggcggtcctcgccgactgggcgcgctccgcgggcggttgggcgtccggagccgcggac
gcctcggcccggccggtaggggtcgtcgccgtaccgtccctgacccgaccgcatcttgtc
gggaccctcgctcagggaatcgcttccgtcggtcggcttccttacctgggcgccctgacg
tacaccggccctgacggcgcgcacgcggcacgccgcagcaactccgcccagcgcctcaag
gcgctgtccggcgccttcgctgtccccgaggagctgtccggagccctggcccgtactccc
ggaccggtgctgctcgtggacgacctcaccgactccggctggaccctcgccgtcgctgcc
cgtctgctccggcaggcaggcgcagagcaggttcttccgctggtcctcgccgcggcgggc
tga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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