KEGG   Streptomyces sp. SirexAA-E: SACTE_5876Help
Entry
SACTE_5876        CDS       T01601                                 
Definition
ATP dependent DNA ligase
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
ssx  Streptomyces sp. SirexAA-E
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Class
Genetic Information Processing; Replication and repair; Base excision repair [PATH:ssx03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:ssx03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:ssx03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:ssx03450]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(6688135..6689181)
Genome map
AA seq 348 aa AA seqDB search
MPPVKPMLATSVSAIPPGMQYEAKWDGFRAIVHRDGEEVVLGSRTGKPLTRYFPEVVEAV
RENLPPRCVVDGEIVVAHDGRLDFDRLSERIHPADSRVRTLAERTPASLVVFDILALDDA
SLTGRPLTERRAALERAMGGASPPVHLAPATTDEALARRWFEQYEGAGLDGVVAKPLDLT
YRPDVRAMYKVKHERTADCVVAGYRFHKSGPVVGSLLLGLYDAQGALQHVGVSAAFPMKR
RAELVQELEPLRIDPAEHPWAAWADAAAHEGARLPGAPSRWSGKKDMSWVAIAPERVCEV
AYDHMEGDRFRHTARFRRWRPDRAPTSCTYAQLEEVVRYDLSDVLDGG
NT seq 1047 nt NT seq  +upstreamnt  +downstreamnt
atgcctcccgtgaaaccgatgctcgccacgtccgtatccgcgattccgcccggtatgcag
tacgaggcgaagtgggacggcttccgggcgatcgtgcaccgggacggcgaggaggtggtg
ctcggcagccggaccgggaagccgctcacccgctacttccccgaggtggtcgaggcggtg
cgggagaatctgccgccgcgctgtgtggtcgacggggagatcgtggtggcgcacgacggc
cggctggacttcgaccggctgagcgagcgcatccacccggcggactcccgggtgcggacc
ctcgcagagcgcacgccggcctccctggtcgtcttcgacatcctggcgctggacgacgcg
tcgctgaccggccgtccgctgacggagcggcgggcggcgctggagcgggccatgggcggc
gcgtcgccgccggtgcatctggcgcccgccaccaccgacgaggccctggcccggcggtgg
ttcgagcagtacgagggcgccgggctggacggggtggtggccaagccgctggacctgacc
taccgacccgacgtacgggcgatgtacaaggtcaagcacgagcggacggcggactgcgtc
gtggcgggctaccgcttccacaagagcggcccggtggtcggctcgctgctgctggggctg
tacgacgcccagggcgcccttcagcacgtcggggtgagcgcggcgttcccgatgaagcgg
cgtgccgagctcgtccaggagctggaaccgctgcggatcgatcccgccgagcacccgtgg
gcggcctgggcggacgcggcggcccacgaaggggcgcggctgccgggcgcgccgagccgc
tggtccggcaagaaggacatgtcgtgggtggcgatcgccccggagcgggtctgcgaggtg
gcgtacgaccacatggagggcgaccgcttccgccacaccgcccggttccggcgctggcgc
ccggaccgtgcccccaccagctgcacctacgcacagctggaggaggtcgtgcggtacgac
ctgtccgacgtgctcgacggcggctga
DBGET integrated database retrieval system