KEGG   Sphingobium sp. SYK-6: SLG_00540Help
Entry
SLG_00540         CDS       T01622                                 

Gene name
mutM
Definition
formamidopyrimidine-DNA glycosylase/DNA-(apurinic or apyrimidinic site) lyase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ssy  Sphingobium sp. SYK-6
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ssy00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    SLG_00540 (mutM)
Enzymes [BR:ssy01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     SLG_00540 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SLG_00540 (mutM)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
NITE: 
UniProt: 
Position
49287..50096
Genome map
AA seq 269 aa AA seqDB search
MPELPEVETTVAGLRAVLQDAELIEVETRRADMRFPFPEDLRQRLTGARVTALGRRAKYG
LIDTDRGDTMIFHLGMSGRWRIDPLEIGKHDHLLLATARHRLALHDPRRFGFVQLTERSA
LAAFPAFVALGPEPLGEAFDADYLAAALMGRAAPIKAMLLDQRIVAGLGNIYVCEALNMA
GIAPTRAAGRIGKARLARLVDAIRDVLQAAIAAGGSTLRDYARPDGELGYFAKDWRVYGR
EGLACVCGGIVRRRLDSGRSTFYCAACQR
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaactgcctgaagtcgagacaacggttgccggcctgcgggccgtgctccaggac
gcggaactcatcgaggtcgaaacgcgccgggcggacatgcggtttcccttcccggaggat
ctgcgccagcggctcaccggcgcccgggtgaccgcgctcggccgccgcgccaaatatggg
ctgatcgataccgatcggggtgacacgatgatctttcatctcggcatgtccggccgctgg
cggatcgatccgctggagatcggcaagcatgaccatctcctcctcgcgaccgcccggcac
cggctggccctgcacgatcctcgccggttcggcttcgtccagctcacagaacgctcggcc
ctggcggctttcccggccttcgtcgcgctcgggccggaaccgctcggcgaggccttcgat
gccgattatctggcggcggccttgatgggccgcgcagcgccgatcaaggcgatgctgctc
gatcagcggatcgttgcggggctcggcaacatctatgtgtgcgaggcgctcaacatggcg
ggcatcgcgccgacccgggcggccgggcgcattggcaaggcgcgcctggcacgattggtc
gacgccattcgcgacgtgctccaggcagccatcgcggccggcggctccaccctgcgcgat
tatgcgcgaccggatggcgagctcggctatttcgcgaaggactggcgcgtctatgggcgg
gaaggccttgcctgcgtctgcggcggcatcgtgagacgacgactcgattccggccggtcg
accttctattgtgcggcttgccagcgatag

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