KEGG T01622: SLG

Sphingobium sp. SYK-6: SLG_00710

Entry

SLG_00710 CDS T01622

Gene name

mdh

Definition

malate dehydrogenase

Orthology

K00024

malate dehydrogenase [EC:1.1.1.37]

Organism

ssy Sphingobium sp. SYK-6

Pathway

ssy00020	Citrate cycle (TCA cycle)
ssy00620	Pyruvate metabolism
ssy00630	Glyoxylate and dicarboxylate metabolism
ssy00680	Methane metabolism
ssy01100	Metabolic pathways
ssy01110	Biosynthesis of secondary metabolites
ssy01120	Microbial metabolism in diverse environments

Module

ssy_M00009	Citrate cycle (TCA cycle, Krebs cycle)
ssy_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ssy_M00012	Glyoxylate cycle
ssy_M00168	CAM (Crassulacean acid metabolism), dark

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:ssy00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:ssy00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:ssy00630]
Metabolism; Energy metabolism; Methane metabolism [PATH:ssy00680]

SSDB

Motif

Pfam:

Ldh_1_N Ldh_1_C F420_oxidored ThiF Glyco_hydro_4 NAD_binding_10 3HCDH_N NAD_Gly3P_dh_N UDPG_MGDP_dh_N

Other DBs

NCBI-GI:

NCBI-GeneID:

NITE:

UniProt:

Position

66527..67489

AA seq 320 aa
MARKKIALIGAGNIGGTLAHLAALKGLGDIVLFDVVEGVPQGKALDLSQCGPVEGFDAKI
TGSNDYADIAGADVIIVTAGVARKPGMSRDDLLGINLKVMKAVGEGIKANAPDAFVICIT
NPLDAMVWALREFSGLPHNKVVGMAGVLDSARFATFLAWEFGVSVKDVNAFVLGGHGDTM
VPVTSYTTVSGIPVDDLVKMGKSSKEKIDAIVARTRSGGGEIVGLLKTGSAYYAPATSAI
AMAEAYLGDQKRILPAAVHVDGKYGLDGLYVGVPVMIGAGGAEEVIEIALDDEAKQNFQV
SVDAVKELLVACRGIDPSLA

NT seq 963 nt +upstreamnt +downstreamnt
atggctcgcaagaagatcgctctcatcggcgccggcaacattggcggcacgctcgctcat
ctcgcagccctgaagggtctgggcgacatcgttctcttcgacgtggtggaaggcgtgccg
cagggcaaggcgctggatctctcccagtgcggcccggtggaaggcttcgacgcgaagatc
accggctccaacgactatgccgacatcgcgggtgcggacgtcatcatcgtcactgccggc
gttgcgcgcaagccgggcatgagccgcgacgatctgctcggcatcaacctcaaggtcatg
aaggccgtgggtgaaggcatcaaggccaacgcgcccgacgccttcgtcatctgcatcacc
aatccgctggacgccatggtctgggcgctgcgcgaattctccggcctgccgcacaacaag
gtggtcggcatggcgggcgtgctcgactcggcgcgcttcgccactttcctcgcctgggaa
ttcggcgtgtcggtgaaggatgtgaatgccttcgtgctcggcggccatggcgacaccatg
gtgccggttaccagctacacgactgtctcgggtattccggtcgacgacctcgtgaagatg
ggcaagtccagcaaggaaaagatcgacgccatcgtggcgcgcacccgcagcggcggcggc
gagatcgtcggcctgctgaagaccggctcggcttattacgcgccggccaccagcgccatc
gcgatggccgaggcctatcttggcgaccagaagcgcatcctgcccgcagcggtgcatgtc
gacggcaaatacgggctcgatggcctctatgtcggcgtcccggtgatgatcggcgcgggc
ggtgccgaggaagtgatcgagatcgcgctcgatgacgaagcgaagcagaatttccaggtc
agcgtcgatgcagtgaaggaactgctggtggcgtgccggggcatcgaccccagcctcgcc
tga

All links

Pathway (11)   
   KEGG PATHWAY (7)   
   KEGG MODULE (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   NITE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (35)   

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