KEGG   Sphingobium sp. SYK-6: SLG_12500
Entry
SLG_12500         CDS       T01622                                 
Symbol
ligB
Name
(GenBank) protocatechuate 4,5-dioxygenase beta chain
  KO
K04101  protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
Organism
ssy  Sphingobium sp. SYK-6
Pathway
ssy00362  Benzoate degradation
ssy00624  Polycyclic aromatic hydrocarbon degradation
ssy00627  Aminobenzoate degradation
ssy01100  Metabolic pathways
ssy01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:ssy00001]
 09100 Metabolism
  09111 Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    SLG_12500 (ligB)
   00627 Aminobenzoate degradation
    SLG_12500 (ligB)
   00624 Polycyclic aromatic hydrocarbon degradation
    SLG_12500 (ligB)
Enzymes [BR:ssy01000]
 1. Oxidoreductases
  1.13  Acting on single donors with incorporation of molecular oxygen (oxygenases)
   1.13.11  With incorporation of two atoms of oxygen
    1.13.11.8  protocatechuate 4,5-dioxygenase
     SLG_12500 (ligB)
SSDB
Motif
Pfam: LigB
Other DBs
NCBI-ProteinID: BAK65925
NITE: SLG_12500
UniProt: G2IQQ3
Position
complement(1362566..1363474)
AA seq 302 aa
MARVTTGITSSHIPALGAAIQTGTSDNDYWGPVFKGYQPIRDWIKQPGNMPDVVILVYND
HASAFDMNIIPTFAIGCAETFKPADEGWGPRPVPDVKGHPDLAWHIAQSLILDEFDMTIM
NQMDVDHGCTVPLSMIFGEPEEWPCKVIPFPVNVVTYPPPSGKRCFALGDSIRAAVESFP
EDLNVHVWGTGGMSHQLQGPRAGLINKEFDLNFIDKLISDPEELSKMPHIQYLRESGSEG
IELVMWLIMRGALPEKVRDLYTFYHIPASNTALGAMILQPEETAGTPLEPRKVMSGHSLA
QA
NT seq 909 nt   +upstreamnt  +downstreamnt
atggcacgcgttaccacgggcatcacgtccagccacattcccgcgctcggcgcggccatc
cagaccggcaccagcgacaatgattactggggcccggtgttcaagggctaccagccgatc
cgcgactggatcaagcagcccggcaacatgccggacgtcgtgatcctggtctataacgac
catgcctcggccttcgacatgaacatcatcccgaccttcgcgatcggctgcgcggaaacg
ttcaagcccgccgacgagggatggggcccgcgcccggtgcccgacgtgaagggccatccg
gaccttgcctggcacatcgcccagagcctgatcctcgacgagttcgacatgaccatcatg
aaccagatggacgtcgatcatggctgcaccgtgccgctctcgatgatcttcggcgagccc
gaggaatggccgtgcaaggtcatccccttcccggtcaatgtcgtcacttatccgccgccg
tcgggcaagcgctgcttcgcgctcggtgacagcatccgcgccgcggtcgagagcttcccg
gaagacctcaacgtccatgtctggggcaccggcggcatgagccaccagcttcagggcccg
cgcgccggcctcatcaacaaggagttcgacctgaacttcatcgacaagctgatcagcgac
cccgaggagctgagcaagatgccgcacatccagtatctgcgcgaaagcggatcggaaggc
atcgagctggtcatgtggctcatcatgcgcggcgcgctgccggagaaggtgcgggatctc
tacaccttctatcacatcccggcctccaacaccgcgctcggcgcgatgatcctgcagccg
gaggagaccgcaggtacaccgctcgaaccgcgcaaggtgatgagcggacacagcctggcc
caggcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (30)   

Download RDF
DBGET integrated database retrieval system