KEGG T04408: AXG53

Stenotrophomonas sp. KCTC 12332: AXG53_11530

Entry

AXG53_11530       CDS       T04408

Name

(GenBank) 23S rRNA methyltransferase

K03215

23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]

Organism

stek Stenotrophomonas sp. KCTC 12332

Brite

KEGG Orthology (KO) [BR:stek00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:stek03009]
    AXG53_11530
Enzymes [BR:stek01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     AXG53_11530
Ribosome biogenesis [BR:stek03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    AXG53_11530

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_31 Methyltransf_25 PCMT MTS Methyltr_RsmB-F Methyltransf_11 RrnaAD Cons_hypoth95 TRAM Met_10 Methyltransf_23 Methyltransf_15 Methyltransf_12 UPF0020 Methyltransf_32

Other DBs

NCBI-ProteinID:

AMJ57201

UniProt:

A0A126NP55

Position

complement(2713464..2714804)

AA seq 446 aa
MARSRSPRIDKTPFQTDILDLSHDGRGVARRDGEGGKVTFISGALPGETVMAEQTGKSRH
FDEAKTVEVLKASPNRVQPRCPHFGVCSGCVLQHLEESQQIVAKQHVLTENLTRIGHVSP
GSVLPPLVGDSWGYRRKGRFSVRRVEKKDKTLVGFRELDPRFVADLSQCLTVIPEIGGKV
AALSEFIESLDGKRDIPQIEFIAGDAAIALTVRHLQPLSDADRQAWIAFGQTHGFAIYLQ
SGGLHTVAPLWPAEGVALSFALPQWDVELAFQPLDFIQVNAKLNQQMIAHALTLLDAQPD
ERVLDLFCGLGNFTLPLARTVRQVVGVEGEAGLVARAKENAQRNGLDNAEFHAADLTLDQ
SSAPWMQQGFDKLLLDPPRSGAIDVLKQLPLDQFKRIVYVSCHPGSLARDAGYLVNERGF
TLVSAGAMDMFPHTAHVESIAVFEKH

NT seq 1341 nt +upstreamnt +downstreamnt
gtggcccgatccagatccccccgcatagacaaaaccccgttccagaccgacatcctcgac
ctcagccacgatggccgtggcgttgcgcgccgcgatggcgagggtggcaaggtcaccttc
atcagcggtgcgctgccgggtgaaacggtgatggccgaacagaccggcaaaagccggcat
ttcgatgaagccaagacggtggaagtgctcaaggcctcgccgaaccgcgtgcagccgcgc
tgcccgcatttcggcgtgtgttccggctgcgtgctgcagcatctggaggagtcgcagcag
atcgtggccaagcagcatgtgctgaccgagaacctgacccgcatcggtcatgtcagcccg
ggcagcgtgttgccgccgctggtgggtgacagttggggctatcgccgcaagggccggttc
tcggtgcgccgggtcgagaagaaggacaagacgctggtcggcttccgcgaactggacccg
cgtttcgttgcggatctgtcgcagtgcctgacggtgatcccggagatcggcggcaaggtt
gcggcgctgtccgaattcattgaatcgctggacggcaagcgcgacatcccgcagatcgag
ttcatcgccggcgatgccgccatcgcgctgaccgtgcgccacctgcagccgctcagcgat
gccgatcgccaggcctggattgccttcggccagacccatggctttgcgatctacctgcaa
tccggtggcctgcatacggttgccccgttgtggccggccgagggcgttgcgttgtcgttc
gcgttgccgcagtgggatgttgaactggccttccagccgctggacttcatccaggtcaac
gccaagctcaaccagcagatgatcgcgcatgcgctgaccctgctggatgcacagccggac
gagcgcgtgcttgacctgttctgcgggttgggcaacttcaccttgccgctggcgcgcacc
gtgcgccaagtggtgggcgtggaaggcgaggccggtctggtcgcacgcgccaaggaaaac
gcgcagcgcaacggcctggacaacgccgaattccatgccgccgatttgaccctggatcag
agcagcgcgccgtggatgcagcagggcttcgacaagctgctgctggacccgccgcgttcg
ggcgcgatcgacgtgctcaagcagttgccgctggatcagttcaaacgcattgtctatgtc
agctgccacccgggttcgctggcacgcgatgccggttacctggtcaacgagcggggtttc
accctggtgtcggccggtgcgatggacatgttcccgcataccgcgcacgtggaaagcatt
gccgtgttcgagaagcactga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (25)   

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