KEGG   Symbiobacterium thermophilum: STH1054
Entry
STH1054           CDS       T00196                                 
Name
(GenBank) putative RNA nucleotidyltransferase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
sth  Symbiobacterium thermophilum
Pathway
sth03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sth00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    STH1054
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sth03019]
    STH1054
Enzymes [BR:sth01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     STH1054
Messenger RNA biogenesis [BR:sth03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     STH1054
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd tRNA_NucTran2_2 HD
Other DBs
NCBI-ProteinID: BAD40039
UniProt: Q67QK4
Position
1169497..1170870
AA seq 457 aa
MGGAARALRLGWGRWALPGRLRRALPPGGRTILARLTGAGHEAVVVGGAVRDLLLGLVPQ
DWDLATSARPAELQALFPEGRAVGAARETGTLLIPGDGTTYEITPYRAGRLEGDLARRDF
TIDAMAATPEGRLIDPLGGRRDLAAGVVRACGRPEDRLAEDPLRMLRAVRLAAQFDLELD
PALARAIAALAPRLQAVAPERIGAEFGRLLVTDRPAWGMQRLRELGLLHQFAPELLEMVG
VEQNRYHAFPVWEHSLMALALVPPALHLRLAALLHDVAKPRCLSVDADGERHFYGHEAVG
AELADRLLRRLRFDNATREKAVHLVRRHMDLHLDGPVTDAALRRMVRRIGVEHLDDLVQL
RRADRLASGKREGDLGPDTMAILDGIRRVLAEDAALKVTDLAVDGHDVMAAFGRGPGPYV
GQVLEALLEEVLDRPELNRREALLRRLQEMADGGWKG
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgggcggagcggccagggcgctgcggctcggctggggccggtgggccctgccgggccgg
cttcggcgcgccctgcctcccggcgggcggacgatcctggcgaggctcacaggagccggg
cacgaggcggtcgtggtcggcggcgcggtgcgggacctcttgctgggcctcgtaccccag
gactgggacctggcgaccagcgcccgcccggccgagctgcaggccctgttcccggaaggc
cgggccgtgggcgcggcccgggagaccggcacgctgctgatcccgggggacgggacgacc
tacgagattacgccctaccgcgccggcaggctggaaggggacctggcccggcgcgacttc
accatcgacgccatggccgccacccccgaaggccggctgatcgatcccctcggggggcgg
cgggacctggcggcgggggtcgtgcgggcctgcggccgacccgaggaccggctggccgag
gacccgctgcggatgctgcgggccgtgcggctggcggcccagttcgacctggagctggac
ccggccctggcccgggccattgccgcgctcgcgccgcggcttcaggccgtggcccccgag
cggatcggcgccgagttcggccggctgctggtgaccgaccggcccgcgtgggggatgcag
cggctgcgggagctggggctgctgcatcagttcgccccggagctcctggagatggtgggg
gtggaacagaaccggtaccacgccttccccgtgtgggagcattcgctgatggccctggcc
ctggtgccgcccgccctgcacctccgcctcgcggcgctgctgcacgacgtcgccaagccc
cggtgcctctccgtggacgcggacggggagcgccacttctacgggcacgaggcggtcggg
gccgaactggctgaccggctgctgcggcggctgcggttcgacaacgccacccgggaaaag
gccgtgcacctggtgcgccgccacatggacctgcacctggacggcccggtcaccgacgcg
gccctgcgccggatggtccggcggatcggggtggagcacctggacgacctggtgcagctt
cgccgggccgaccggctggcttcgggcaagcgggagggcgacctgggcccggacacgatg
gcgatcctggacggcatccggagggtgctggcggaggacgcggcgctgaaggtcacggac
ctggccgtcgacggccacgacgtgatggccgccttcgggcgcggcccgggcccctacgtg
ggccaggtgctggaggccctgttggaggaggttctggatcggccggagctgaaccggcgg
gaggcgctgctgcggcggctgcaggagatggcggacggcggctggaaaggatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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