KEGG   Symbiobacterium thermophilum: STH2818
Entry
STH2818           CDS       T00196                                 
Name
(GenBank) RNA methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
sth  Symbiobacterium thermophilum
Brite
KEGG Orthology (KO) [BR:sth00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sth03009]
    STH2818
Enzymes [BR:sth01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     STH2818
Ribosome biogenesis [BR:sth03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    STH2818
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRAM Methyltransf_31 Methyltransf_25 Cons_hypoth95 MTS Methyltransf_11 Methyltransf_15 PCMT Met_10 PrmA RrnaAD Methyltransf_4 Methyltransf_12 Methyltransf_32 UPF0020 Ubie_methyltran DOT1 N6_N4_Mtase
Other DBs
NCBI-ProteinID: BAD41803
UniProt: Q67KJ5
Position
complement(3031893..3033272)
AA seq 459 aa
MQETQKPPVRPGQEIEVTVHGLGSSGEGVARYEGLTVFIPGGAPGDRLSARVQEVKRNYA
RAALVRVEEPSPDRVAPPCPVVGKCGGCQLQHIAYEAQLGLKRQQVVDAVERLGRLSGVT
VHPTLGMADPWGYRNKAQFPVGRRSGRVIAGFFAPGSHRIVDIERCAIQHPLANRIMAEV
KELAGRFGVPIYDERSHTGVLRHVLARVGRGTGEAMAVLVTNGPHLPRGKDIARELMTRI
PELVSVVQNINPARTNVVLGRESRVLAGRDAITDYIGDLQFSISPVSFFQVNPAQTEVLY
DKALEYAGLTGSETVIDLYCGIGTISLFLARRCREVVGIEWVEEAVADARENAARNGIGN
VRFIAGDAAVEMPRLAAEGVRADVIVLDPPRKGCDGPVLEAIAQVAPRRVVYVSCNPASL
ARDLGRLAEMGYRTVEVQPVDMFPHTAHVECVARVEREG
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgcaggagacgcagaagcccccggttcgcccggggcaggagatcgaggtgacggtccac
ggcctcggcagcagcggcgagggcgtggcccgctatgagggactgaccgtatttatcccc
ggcggcgcccccggcgaccgcctgtccgcgcgcgtgcaggaggtgaagcggaactacgcc
cgggcggcgctggtgcgggtggaggagccgtcgccggaccgggtggctccgccctgcccg
gtggtggggaagtgcggcgggtgccagctgcagcacatcgcctacgaggcgcagctcggg
ctgaagcggcagcaggtggtcgacgccgtggagcggctggggaggctgagtggggtgacg
gtgcacccgaccctgggcatggcggatccctgggggtaccgcaacaaggcgcagttcccg
gtgggacggcgctccggccgggtgatcgccggtttcttcgccccgggcagccaccgcatc
gtggacatcgagcggtgcgccatccagcacccgctggccaaccggatcatggccgaggtg
aaggagctggccgggcggttcggcgtgccgatctacgatgagcgcagccacaccggcgtc
ctgcgccacgtgctcgcacgggtgggccgggggaccggcgaggcgatggcggtgctggtg
accaacggcccgcatctgccccgcggcaaggacatcgcccgggagctgatgacccgcatc
cccgagctggtcagcgtggtgcagaacatcaacccggcccgcaccaacgtggtgctgggc
cgggagagccgcgtgctcgcggggcgggatgcgatcaccgactacatcggcgacctgcag
ttcagcatctcccccgtctccttcttccaggtgaacccggcgcagaccgaggtgctgtac
gacaaggccctggagtacgccggcctcaccggttcggagacggtgatcgacctctactgc
ggcatcggcacgatctcgctgttcctggcgcgccggtgccgggaggtcgtcggcatcgag
tgggtggaggaggcggtggcggacgcccgggagaacgcggcccgcaatggcatcgggaac
gtgcggttcatcgccggcgacgcggcggtggagatgccccggctggcggcggagggggtg
cgggcggacgtgatcgtgctggacccgccccgcaagggctgcgacgggccggtgctggag
gcgatcgcgcaggtggcgccgcggcgggtggtctacgtgtcgtgcaaccccgccagcctc
gcccgggacctgggccggctggcggagatggggtaccgcaccgtcgaggtgcagccggtg
gatatgttcccgcacacggcgcacgtggagtgcgtcgcgcgggtggagagggagggatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (45)   

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