KEGG   Streptococcus thermophilus S9: AVT04_00635
Entry
AVT04_00635       CDS       T04785                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
sths  Streptococcus thermophilus S9
Pathway
sths02024  Quorum sensing
sths03060  Protein export
sths03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sths00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    AVT04_00635
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AVT04_00635
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AVT04_00635
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sths02044]
    AVT04_00635
Enzymes [BR:sths01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     AVT04_00635
Secretion system [BR:sths02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   AVT04_00635
  Eukaryotic Sec-SRP protein
   AVT04_00635
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 cobW Zeta_toxin CbiA AAA_33 Roc MMR_HSR1 Arf nSTAND3 DO-GTPase1 Halogen_Hydrol ATP_bind_1 6PF2K APS_kinase AAA_24 AAA_18 TsaE PduV-EutP AAA_14 RNA_helicase AAA_28 DUF463 NACHT Lyase_catalyt AAA_16 RGS-like
Other DBs
NCBI-ProteinID: ALX90467
Position
complement(120756..122318)
AA seq 520 aa
MAFESLTERLQGVFKNLRRKGKLSEKEVQEVTKEIRLALLEADVALPVVKTFIKRVRERA
VGHEIIDTLDASQQIIKIVNEELTEILGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGK
LANKLIKEQEARPMMIAADIYRPAAIDQLKTLGQQINVPVFDMGTETPAVEIVRNGLEQA
RANKNDYVLIDTAGRLQIDETLMKELRDIKDFAHPNEILLVVDSMIGQEAANVAKEFNEQ
LDITGVVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGD
LLTLIEKASQEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMANN
PALANVKVDEKQIARKRAIVLSMTPEERENPDLLTPSRRRRIANGSGNTFIEVNKFIKDF
NQAKQMMQGIMSGDMEQMMRQMGLNPNNLPKNMPNMPDMGNMDMSALEGMMGGTGMPDLG
NMDLSQMLGGGLKGKIGSFAMKHAMKRQANKLKKAKKKRK
NT seq 1563 nt   +upstreamnt  +downstreamnt
atggcttttgaaagcttaacggaacgcttgcaaggtgttttcaaaaatttaagacgtaaa
ggaaaactttcagagaaagaagttcaagaagtcactaaagagattcgtttggcacttctt
gaagcagacgtagctctaccagttgttaagacatttatcaaacgtgttcgtgaacgtgct
gtaggtcacgaaatcattgatactcttgatgcttcacaacaaatcattaagattgttaat
gaagaattgacagaaattcttgggtctgaaacatctgagattgagaaatctccaaagatt
ccaactatcattatgatggttggtcttcaaggggctggtaaaacaacctttgcaggtaaa
ttggctaataaactgattaaagaacaagaagctcgtccaatgatgattgctgcagatatc
tatcgtccagcagccattgatcagttgaaaactttgggacaacaaatcaatgttcctgtt
tttgatatgggaacagagacaccagcagttgagatcgtcagaaatggtttggaacaagcg
cgtgctaataaaaatgactatgtcttgattgatacggctggtcgtttgcagattgacgaa
accctcatgaaagagttgcgtgatatcaaagattttgctcatccaaacgagattctcttg
gttgtagatagcatgattggtcaggaagctgctaacgttgccaaggagtttaatgaacaa
ctagatatcacaggtgtcgttcttactaaaattgatggtgatacacgtggtggtgcggct
ctttcaattcgtgagatcactggtaagccgattaaatttacaggtactggtgagaaaatt
acggatatcgagactttccacccagaccgtatgtcaagccgtatcttaggtatgggtgac
cttcttacccttattgaaaaagcttctcaggagtatgatgagaaaaaatctcttgagtta
gctgagaagatgcgtgaaaacacctttgatttcaatgattttattgaccaattagaccaa
gtgcaaaatatgggtcctatggaggatttactaaagatgttgccaggtatggctaacaat
ccagccttggctaatgttaaagtagacgaaaagcagattgctcgcaagcgtgccattgta
ttatcaatgacaccagaagaacgtgaaaatccagatctcttgactccaagtcgtcgtcgc
cgtattgccaatggttcagggaataccttcatcgaagtaaacaagtttattaaagacttc
aatcaagcaaaacaaatgatgcaaggcattatgtctggtgatatggagcaaatgatgcgt
caaatgggtcttaacccaaataatctgcccaaaaacatgccaaatatgcctgatatgggg
aatatggacatgtctgctcttgaaggcatgatgggtggcactggtatgccagatcttgga
aatatggatctaagccaaatgcttggtggtggtcttaaaggtaagatcggttcatttgcc
atgaaacatgcgatgaagcgtcaagctaacaagttgaagaaagctaagaaaaaacgtaaa
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (29)   
   Pfam (29)   
All databases (40)   

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