KEGG T01128: Sthe

Sphaerobacter thermophilus: Sthe_0314

Entry

Sthe_0314 CDS T01128

Definition

DNA polymerase LigD, polymerase domain-containing protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

sti Sphaerobacter thermophilus

Pathway

sti03410	Base excision repair
sti03420	Nucleotide excision repair
sti03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:sti03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:sti03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:sti03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_primase_S

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1:complement(352609..353514)

AA seq 301 aa
MSGEQADIQVLQVDGREIVVTSPDKVLWPQDGLTKTDLLDYYQAVAPAMLPYLRDHPVTL
RVFPGGIDRPGHYRRDLPKDAPDWLPSATYSPASRAGELHPPLIPDAAALLWYAERGAIE
FHIWLATADRLEQPDWAVFDLDPGDEVDFPAVLDAALLVRDTLAAQGIDGYPKTSGGRGL
HVFVPLEPVHDFAAVRDWVRGIAAQLAEEHPDQIAVAARGTHEGQRVTVDHAQNSVARNT
AAPYTARGHPGAPVSAPVTWDEVAAGTIRPDQFTLRTMPERIQQLGDLWAPALNAPQRLP
G

NT seq 906 nt +upstreamnt +downstreamnt
atgagcggcgagcaggcagacatccaggtgctccaggtcgacgggcgcgagatcgtcgtc
accagcccggacaaggtcctgtggccgcaggacgggctgaccaagaccgacctgctcgac
tactaccaggccgtggccccggccatgctgccctacctccgcgatcatccggtgaccctg
cgcgtcttccccggcgggatcgatcgaccgggccactaccgccgcgacctgccgaaggac
gcacctgattggctgccgagtgcgacctacagcccggcgtcacgcgccggggagctgcac
ccgccgctaatcccggacgcggcggctctgctctggtacgcggagcgcggcgcgatcgag
tttcatatttggcttgcgaccgcagaccgcctggaacagccggactgggccgtgttcgac
ctcgacccgggcgacgaggtggacttccccgcggtgctggacgctgcgctgctggtccgc
gacacgctggcggcgcaaggcatcgacggctacccaaagaccagcggcgggcggggactg
cacgtcttcgtcccgctcgaacccgtccacgacttcgcggcggtgcgcgactgggtgcgg
ggcatcgccgcccagttggccgaggagcacccggaccagatcgcggtcgccgcccgcggg
acacacgaggggcagcgcgtgaccgtcgaccacgcacagaacagcgtcgcgcgcaacacg
gcggcgccctataccgcgcgcgggcatccaggggccccggtctccgcgccggtcacctgg
gacgaggtagccgccggcacgatacggccagaccagttcaccctgcgcaccatgcccgaa
cggatccagcagctcggcgatctctgggcccccgccctgaacgcgccccagcgcctgcca
ggctga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-STI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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