KEGG   Sphaerobacter thermophilus: Sthe_0771
Entry
Sthe_0771         CDS       T01128                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
sti  Sphaerobacter thermophilus
Pathway
sti03420  Nucleotide excision repair
sti03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sti00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Sthe_0771
   03430 Mismatch repair
    Sthe_0771
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sti03400]
    Sthe_0771
Enzymes [BR:sti01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Sthe_0771
DNA repair and recombination proteins [BR:sti03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Sthe_0771
   MMR (mismatch excision repair)
    Other MMR factors
     Sthe_0771
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor Viral_helicase1 AAA_30 AAA_11 DUF3553 AAA_22 AAA_16 ResIII
Other DBs
NCBI-ProteinID: ACZ38208
UniProt: D1C1U1
Position
1:complement(855445..857661)
AA seq 738 aa
MVWEPSSGGVDLLRGLNEAQQRAVTITEGPVLVVAGPGSGKTRVLTHRVAYLIDQRGVSP
WNILAVTFTNKAAREMRDRLEVLVGPERARQLTVGTFHALCVRILRRDGHLIGLDPRFTI
YDDADQIDAVRQALKALNLDPKQFPPRPILSRISAAKSQVVDPARFAEQVETYWEEIVSR
VYPRYQEILRRNRALDFDDLLVETVRLFDEQPDVLRRYQDWYRYILVDEYQDTNHVQYLL
VHALAAGHRNLCVVGDPDQSIYGWRQADIRNILEFKRDFPDAAEVHLELNYRSTGVIVEA
ADQVIRANTQRIRRQLRTENPRGDRLVVREAYDETQEAQFVVGEIRRLVQSGRYRYRDIA
VLYRTNAQSRPLEDTLIRADIPYQLVGGTRFYERREIKDALALLRLIANPRDAVSLQRVL
ANTPLGKGIGARTLQELERWSSETGLPVYTGLAALAGESGAPAPPVGTRPARLLADVYRT
IAGLEVKSRSMPLSALFDAAVEQTGFAAQFQEGGDPEALERWENVLQLRNVLMTYDELPE
SEALEIFLEESALIADADTIDESGDQVTLITLHAAKGLEFPVVFLVGAEEGILPHARSME
SEAQVEEERRLFYVGITRAKERLYITHTFRRTVWGRDDVSIRSRFVDAIPPELIETTALR
TATPRPSTRPTVVASNGPAAPPAAVPEFRPGMRVFHPRFGDGIVTAVRASRGDQEVTVEF
KRHGQKRLLASLANLTVD
NT seq 2217 nt   +upstreamnt  +downstreamnt
ttggtgtgggagccgtcttccgggggcgtggatctgctccgcgggttgaacgaggcgcag
cagcgcgccgtgacgatcactgagggcccggtcctggtcgtcgccgggccgggtagcggc
aagacacgggtgctgacccaccgtgtcgcctacctcatcgaccagcggggcgtctcgccg
tggaacatcctggccgtcaccttcaccaacaaggccgcgcgcgagatgcgcgatcgcctc
gaggtgctggtcggtcccgagcgcgcccggcagctcaccgtcggcaccttccacgcgctc
tgcgtccgcatcctccggcgcgacggccacctcatcggcctcgacccgcgtttcaccatc
tacgacgacgccgaccagatcgacgcggtgcggcaggcgctcaaggcgctcaacctcgac
ccgaagcagtttcccccgcggccgatcttgagccgcatctccgccgctaagagtcaggtg
gtcgacccggcgcgcttcgccgagcaggtcgaaacctactgggaagagattgtcagccgc
gtctacccgcggtaccaggagatcctgcgccgcaaccgcgcgctcgacttcgacgacctc
ctggtggagacggtccggctattcgacgagcagcccgatgtgcttcgtcgctatcaggac
tggtaccgctacatcctggtcgatgagtaccaggacaccaaccacgtccagtacctgctc
gtccatgccctggcggccgggcaccggaacctctgcgtcgtcggcgaccccgaccagtcg
atctacggctggcggcaggccgacatccgcaacatcctggagttcaagcgcgacttccct
gacgccgccgaggtgcacctggagctgaactaccgctccaccggcgtgatcgtcgaggcc
gccgaccaggtgatccgcgccaacacccagcgcatccgccgccagctccggaccgagaac
ccgcgcggcgatcgcctggtcgtgcgcgaagcgtacgacgaaacccaggaggcgcagttc
gtcgtcggcgagatccgccgcctcgtccagtcgggtcgctaccgctaccgtgacatcgcg
gtgctctaccgcaccaacgcgcagagccggccgctggaggatacgctcatccgcgccgat
atcccgtaccagcttgttggcggcacccggttctacgagcgccgggagattaaggacgcc
ctggcgctcctgcgcctgattgccaacccgcgcgacgcggtgagcctgcagcgggtcctc
gccaacaccccgctcggcaaggggatcggcgcgcgcacgctgcaggagctggagcgctgg
tcctccgagaccggcctcccggtctacaccggcctggccgcgctcgcgggcgagagcggc
gccccggcgccgcccgtcggcacccgccctgccaggctgctcgccgatgtctaccgcacc
atcgccggcctggaggtcaagagccgctcaatgcccctctcggctctgttcgacgcggcc
gttgagcagaccggcttcgccgcccagttccaggagggcggcgatccggaggcgctggag
cgctgggagaacgtgctccagctccgcaacgtgctcatgacgtacgacgaactgcccgag
tcggaggccctcgagatcttcctggaggagtcagccctgatcgccgacgccgacacgatt
gacgagagcggcgatcaggtcaccctcatcaccctccacgcggcgaaggggctcgagttc
cccgtcgtgttcctggtcggagctgaggagggcatcctgccccatgcccggtcgatggag
agtgaggcgcaggtcgaggaggaacgccgcctcttctatgtcgggatcacccgcgccaag
gagcgcctgtacatcacccacaccttccgccgcaccgtctgggggcgcgacgacgtcagc
atccgctcgcgcttcgtcgacgccatcccgccggagttgatcgaaacgaccgcgctgcgc
accgctaccccgcggcccagcacgcgccccacggtcgtggccagcaatgggccggccgcc
ccgccggcggcggtccccgaattccgacccgggatgcgcgtgttccacccgcgcttcggc
gacggcattgttactgcggtgcgtgcatcacgaggtgaccaagaggtaaccgtcgagttc
aagcgccacgggcagaagcgcctgctggcgagcttggccaatctgaccgtagattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (59)   

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