KEGG   Streptococcus salivarius JIM8777: SALIVA_0963
Entry
SALIVA_0963       CDS       T02089                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
stj  Streptococcus salivarius JIM8777
Pathway
stj03030  DNA replication
stj03430  Mismatch repair
stj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:stj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SALIVA_0963 (dnaX)
   03430 Mismatch repair
    SALIVA_0963 (dnaX)
   03440 Homologous recombination
    SALIVA_0963 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:stj03032]
    SALIVA_0963 (dnaX)
   03400 DNA repair and recombination proteins [BR:stj03400]
    SALIVA_0963 (dnaX)
Enzymes [BR:stj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SALIVA_0963 (dnaX)
DNA replication proteins [BR:stj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SALIVA_0963 (dnaX)
DNA repair and recombination proteins [BR:stj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SALIVA_0963 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_gamma3 AAA_22 RuvB_N AAA_5 TIP49 AAA_30 AAA_assoc_2 AAA_19 AAA_14 AAA_2 AAA_7 AAA_24 AAA_16 DnaX_C DNA_pol3_delta AAA_18 ApoLp-III FapA AAA_11 Glyco_tranf_2_5
Other DBs
NCBI-ProteinID: CCB95281
Position
967859..969511
AA seq 550 aa
MYQALYRKYRSQTFGEMVGQKVISTTLRQAVESGKISHAYLFSGPRGTGKTSAAKIFAKA
MNCPNQVDGEPCNHCDICRDITNGSLEDVIEIDAASNNGVDEIREIRDKSTYAPSRATYK
VYIIDEVHMLSTGAFNALLKTLEEPTENVVFILATTELHKIPATILSRVQRFEFKSIKQG
AIKEHLASILEKEGLTFDDEALTIIARRAEGGMRDALSILDQALSLSPDNHVSQAVAEEI
TGSIGLTALDSFVANVRNQETTQALSNLETLFDNGKSMSRFATDLLEYFRDLLIVKAGGE
NSHHSPLFEENLSLEQDRLFQLIDLVTSALPEIKTGTHPKIYAEMLTIKLSETHTQVSQE
IPGNLQEELDSLRREVEGLRKALKEGKVQGEVAPTRKVKPAYQYKVDREKILTIMRETME
NPQKSRQCLDALKATWPEILDSISPQNRALLNGSEPVLANQENAILAFNAAFNAEQVMKR
SDLNDMFGNIMSSAAGFSPNIMAVPKAEFEKLRTEFARSLKSKEELEKEDREEYIPQELE
FLSDVVEIED
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgtatcaagccttatatcgtaaataccgtagtcagacctttggtgaaatggttggtcaa
aaagtgatttcaaccacgctcagacaggcggtagagtcggggaaaatcagccatgcctat
ctcttttctgggccacgtggtaccggtaaaaccagtgcggcgaaaatctttgccaaggct
atgaactgtcctaatcaagttgatggtgagccttgtaatcactgcgatatttgtcgcgat
attactaacggaagtctcgaagatgttatcgagattgatgcggcttccaacaacggtgtg
gatgagattcgtgagattcgtgataagtcgacctatgctccaagtcgtgcgacttacaag
gtctatattatcgacgaggttcacatgctttcgacaggtgccttcaatgctcttttgaaa
accttggaagaaccaaccgaaaatgtggtctttatcctggcgactactgaattacataag
attccagcaaccatcctttctcgtgtccaacgttttgagtttaaatcgatcaagcaggga
gctattaaagagcatttggcttcaattctggaaaaagaaggattgacctttgatgatgag
gctttgaccattattgctcgtcgtgcggaaggtggtatgcgtgatgctttgtcaatctta
gaccaagcactgagtctttctcctgacaatcatgtcagccaagccgtagctgaagaaatc
actggttctattggtttaacagccctagacagttttgtcgctaacgttcgcaatcaagag
actacgcaagctttatcaaatcttgaaactctttttgataatggtaagtctatgagccgt
tttgcgacggatctcttggagtatttccgtgatcttttgattgtcaaagcgggcggagag
aacagtcaccatagtcccctttttgaagagaatctttctctggagcaagaccgacttttc
caattgattgacttggttacaagtgccttgccagaaattaaaactggaacacatcctaaa
atctatgcggaaatgctgactataaaattgtcagagactcatactcaggtttcacaagaa
atcccagggaatttacaagaagagttagatagtcttcgtcgcgaggtagaaggtctacgt
aaagctcttaaagagggcaaagtccaaggagaagtagcaccaactcgaaaagtcaaacct
gcttatcagtacaaggtggatcgtgaaaagattctcacgattatgcgtgaaaccatggaa
aatcctcagaaatcacgccagtgtctggatgccctaaaggcaacttggcctgaaatcttg
gattctattagcccacaaaatagggcacttttgaatggatctgaacctgtactggccaat
caagaaaatgctatcctggcatttaatgcagcttttaatgctgaacaggtcatgaaacgc
agtgatctcaatgatatgtttggtaatatcatgagttcagctgccggtttctcacctaat
attatggctgttccaaaagcagaatttgaaaaactccgtacagaatttgcacgcagtctc
aaatccaaagaagaattggaaaaagaagatcgtgaagagtatattcctcaagaactcgag
tttctctctgatgtagtagaaatagaggactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (22)   
   Pfam (22)   
All databases (34)   

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