KEGG   Streptococcus parauberis: STP_0074
Entry
STP_0074          CDS       T01504                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
stk  Streptococcus parauberis
Pathway
stk03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:stk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    STP_0074 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:stk03021]
    STP_0074 (rpoA)
   03400 DNA repair and recombination proteins [BR:stk03400]
    STP_0074 (rpoA)
Enzymes [BR:stk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     STP_0074 (rpoA)
Transcription machinery [BR:stk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     STP_0074 (rpoA)
DNA repair and recombination proteins [BR:stk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      STP_0074 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L Mg_chelatase_C
Other DBs
NCBI-ProteinID: AEF24522
Position
73723..74661
AA seq 312 aa
MIEFEKPIITKIDENKDYGRFVIEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIKIDGVL
HEFDTIPGVREDVMQIILNVKGLAVKSYVEDEKMIELDVEGPAEVTAGDILTDSDIELVN
PDHYLFTIAEGHSLKATMTVAKKRGYIPAEGNKQDDAPVGTLAVDSIYTPVKKVNYQVEP
ARVGSNDGFDKLTIEIMTNGTIIPEDALGLSARVLIEHLNLFTDLTEVAKTTDVMKETEK
VNDEKILDRTIEELDLSVRSYNCLKRAGINTVFDLTEKSEPEMMKVRNLGRKSLEEVKVK
LADLGLGLKNDK
NT seq 939 nt   +upstreamnt  +downstreamnt
atgattgagtttgaaaaaccaataataacaaaaattgatgaaaataaagattacggacgt
tttgtaatcgaaccactagaacgtggttacggtacaactctaggtaattcacttcgtcgt
gtacttctgtcatcacttccaggtgctgcagtaacatcgattaaaattgatggcgtacta
cacgaatttgatacaatcccaggtgtacgtgaagatgtaatgcaaatcatccttaatgtt
aaaggacttgcagtaaaatcatatgtagaagacgaaaagatgatcgaacttgacgtagaa
ggaccagctgaagtaactgctggagatatcctcactgacagcgacatcgaacttgttaac
ccagatcattatctatttacaatcgcagaaggtcactctttgaaagcaacaatgactgtt
gctaaaaaacgtggttacattcctgcagaaggtaacaaacaagatgatgcacctgttgga
acattggctgttgattcaatctacacgccagtaaaaaaagttaactatcaagttgagcct
gcccgtgtcggtagtaatgatggctttgataaattaacaattgaaatcatgacaaatgga
actatcattcctgaagatgcattaggtctatctgctcgagttttaatcgaacaccttaat
ctgtttacagaccttacagaagttgctaagacaactgacgttatgaaagaaacagaaaaa
gtgaacgatgaaaagatacttgatcgcacaatcgaggaacttgatttatccgtacgctca
tataactgtttgaaacgtgcaggaattaacactgtattcgatcttacagaaaaatctgag
cctgaaatgatgaaagtccgtaacttaggtcgtaagagccttgaagaagttaaggttaaa
ctcgctgatttaggtttaggactaaaaaacgataaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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