KEGG   Streptococcus thermophilus LMG 18311: stu1198
Entry
stu1198           CDS       T00213                                 
Symbol
dnaE
Name
(GenBank) DNA polymeraDNA polymerase III alphase III alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
stl  Streptococcus thermophilus LMG 18311
Pathway
stl03030  DNA replication
stl03430  Mismatch repair
stl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:stl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    stu1198 (dnaE)
   03430 Mismatch repair
    stu1198 (dnaE)
   03440 Homologous recombination
    stu1198 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:stl03032]
    stu1198 (dnaE)
   03400 DNA repair and recombination proteins [BR:stl03400]
    stu1198 (dnaE)
Enzymes [BR:stl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     stu1198 (dnaE)
DNA replication proteins [BR:stl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     stu1198 (dnaE)
DNA repair and recombination proteins [BR:stl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     stu1198 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon HHH_3 ASC
Other DBs
NCBI-ProteinID: AAV60834
UniProt: Q5M409
Position
complement(1052832..1055942)
AA seq 1036 aa
MFAQLDTKSVYSFMDSVVDLNTYVKRAKELGYQSIGLMDRDNLYAAYHFAQLAIRNGLRP
LIGTEANLFYEGRKIPFRLLAKNNQGYKNLIKLATELSSGQREFTYFSDYLNDIALILPS
EDWEPGMSLGSEVFIGVRPEDAGKEFDYPVVPLHTVRYFENADRSTIQTLHAISQNVSLS
EVSICPMNQLLFSAKEMEEAYSKLPEALNNLNQLVSDVSYQFDTNLKLPRFNREMPAVDQ
LRQLAQSGLDSKALREPAYQERLDKELSIIHQMGFDDYFLIVWDLLRFGRSRGYYMGMGR
GSAAGSLVAYVLDITGIDPVKNDLLFERFLNKERYSMPDIDIDLPDIYRSEFLHYVRDRY
GSKHSAQIVTFSTFGAKQAIRDVFKRFGAKEFELSQLSKKISFRDTLTTVYEKNMSFRQL
INQRQEFQRAFEIAKAIEGQPRQTSIHAAGIVMSDDDLTNHIPLKAGEDMMVTQYDASAV
EANGLLKMDFLGLRNLTFVQKMKEKLEEEQGIAIDIKSIDLEDSQTLALFASGKTKGIFQ
FEQAGAINLLKRIKPAKFEEVVATTSLNRPGASDYTDNFVARKYGKEKVDLIDPVVAPIL
EPTYGIMLYQEQVMQIAQVFAGFSLGKADLLRRAMSKKDANEMSKMSEQFMEGSRQLGRD
PQVAKRLFSMITKFAGYGFNKSHAYAYSALAFQLAYFKTHYPQIFYDVMLNYSSSDYIRD
AIENGFSLASLDINRIPYMDKISDGKIVLGLKTIKGLPRDFALWIIEDRQQNGKYISIED
FLTRIPSKYQKVDILTPLIQIGLFDRFEPNRRKIIGNLSNLFTFVNELGSLFAESSYSWV
EYEDYSQTERYSIEQDLLGVGLSTHPLHLAQKMASRPYQPISELTLNSKATVLVQLESVR
IIRTKKGDQMAFLSVFDGVNKLDVTLFPETYFYHKDKLSEGSLFYLEGRTQERDGRLQLI
LSNIEEASTERFWILLENHNKDLEVSHILAKYPGHIPVVIRYQGSKETIVSQRYKVSKNE
ELSRELAPFVLKTVLR
NT seq 3111 nt   +upstreamnt  +downstreamnt
atgtttgcacaattggatacaaaatcagtatatagcttcatggacagtgttgtagattta
aacacctatgtaaaacgtgccaaagagcttggttatcaaagcattggtttgatggatcgt
gataatctctatgcggcctatcattttgcccagcttgcaatcagaaatggtttacgtcct
ttaattggaacagaagctaatttattctatgaagggagaaaaattccctttcgcctatta
gctaaaaataatcagggctataaaaacttgataaagttggcaacagagctgtcttcagga
cagcgggagtttacatatttttcagactatctgaatgacattgccctaattcttccaagt
gaggactgggagcctgggatgagtcttggctcagaagttttcattggggtaagacctgag
gatgctggtaaagagtttgattatcctgtggttcctttacatacagtgcgttactttgaa
aatgcagatcgctcgactatccagacgttacatgctatctcacaaaatgtgtccttgtct
gaggtatccatctgtcctatgaatcagctccttttctcggccaaagaaatggaagaagct
tatagtaagcttccagaggctttaaacaatttgaatcagcttgtttcagacgtctcttat
caatttgatacaaatctcaagcttcctcgttttaatcgtgaaatgccagcagttgatcaa
ttgcgtcagttagctcaatctggattagatagtaaagcgttaagagaaccagcttatcag
gaacgtttagacaaggaattgtcaataatacatcaaatgggttttgatgactatttcttg
attgtttgggatttgttacgttttggtcgtagtcgaggttattatatgggaatgggacgt
gggtctgctgcagggagtttggtagcttatgtccttgatattactggaattgatccagtt
aaaaatgatttacttttcgagcgtttcttaaataaggaacgttatagtatgcctgatatc
gatatagacttacctgatatttatcgaagtgagtttcttcattacgttagagaccgttat
ggtagtaagcactctgcacagattgttactttttcaacttttggggctaagcaggctatc
cgagatgtttttaaacgttttggagctaaggaatttgaattatcccaactcagtaaaaaa
atatcttttcgagatactttgacaactgtctatgagaaaaatatgtcattcagacagcta
attaatcagaggcaggaatttcagagagcttttgaaattgctaaggctattgaaggccag
ccaagacaaacctccatacatgctgcaggtatcgtgatgagcgatgatgacctgaccaat
catattcctcttaaggcaggtgaggacatgatggttacacagtacgatgcttccgcagtc
gaggccaatggtttgcttaagatggatttcttggggcttcgaaatttgacctttgttcaa
aaaatgaaggagaagcttgaagaagaacagggaatcgctatcgatatcaaatccattgac
ttggaagattcacaaaccctagcgctttttgccagtggtaagacaaagggaatttttcaa
ttcgagcaggcaggtgctataaatctccttaaacggattaaacctgctaagttcgaagaa
gtagtagcgacaacctctctcaaccgtccaggagctagcgattacacagataatttcgtt
gctcgtaaatatggtaaggagaaagtagatctcattgacccagtggttgctccaattctt
gaacctacctatggtatcatgctttatcaggagcaggttatgcagattgcccaagtattt
gctggctttagccttggaaaagccgatttgcttcgtcgggcaatgtctaaaaaagatgcc
aatgaaatgtccaagatgtccgaacaattcatggaaggaagtcgtcagttagggcgtgac
ccacaggttgctaaacgtctctttagtatgataactaagtttgcaggatatggttttaat
aaaagtcatgcctatgcttattcagccctagccttccaattagcttattttaaaacgcat
tatcctcagatattctatgacgtcatgttaaattattcgtcaagtgattacattagggat
gcaattgaaaatggcttttccttagctagcctggatattaatagaattccttatatggac
aagatttctgatggaaagattgtactaggtctaaaaaccataaaaggtttgcccagagat
tttgcactttggattattgaggatcgccaacaaaatggtaaatacatttctatagaggat
tttttgacacgtattcctagtaaatatcaaaaagtagatattttgacacctttgatccaa
ataggattatttgatcgttttgagcctaatagacggaaaatcatcggaaacttaagcaac
ctctttacttttgttaatgaattagggagtttgtttgcagagtcgtcttattcttgggtg
gagtatgaagactatagtcagacagaacgctacagtatagaacaggatttactaggagtt
ggacttagtacacatccattacatttagctcaaaaaatggcatcacggccctaccaacca
atttctgagttgactttaaacagtaaggctacagttttggtccagcttgaatcagttcgc
attatcagaacgaaaaagggagaccagatggctttcctaagtgtttttgatggggtgaat
aaactggatgtcactctttttccagaaacttatttctatcacaaagataagttaagcgaa
ggtagtctcttttatctagaaggacgaactcaagagcgcgacggacgtcttcaattaatt
ttgtcaaatatagaggaggctagcactgagcgtttctggattttactagagaatcataat
aaagatttagaagtttctcacattttagccaagtatcctggacatattcctgtggttatt
cgttatcagggaagcaaggaaacaatagttagtcaacgatataaagtgtctaagaacgaa
gaactcagtagggaattagcaccctttgtgttgaaaacggttttacgttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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