KEGG S.typhimurium: STM1135

Salmonella typhimurium LT2: STM1135

Entry

STM1135 CDS S.typhimurium

Gene name ycdW

Definition putative oxidoreductase

Orthology K12972 gyoxylate/hydroxypyruvate reductase A [EC:1.1.1.79 1.1.1.81]

Pathway stm00260 Glycine, serine and threonine metabolism
stm00620 Pyruvate metabolism
stm00630 Glyoxylate and dicarboxylate metabolism
stm01100 Metabolic pathways

Class Metabolism; Carbohydrate Metabolism; Pyruvate metabolism
[PATH:stm00620]
Metabolism; Carbohydrate Metabolism; Glyoxylate and dicarboxylate
metabolism [PATH:stm00630]
Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:stm00260]

SSDB

Motif Pfam: 2-Hacid_dh_C NAD_binding_2 NAD_Gly3P_dh_N

Other DBs NCBI-GI: 16764491
NCBI-GeneID: 1252653
UniProt: Q8ZQ30

Structure

PDB: 3KBO

Position 1225066..1226004

AA seq 312 aa
MEIIFYHPTFNAAWWVNALEKALPHARVREWKVGDNNPADYALVWQPPVEMLAGRRLKAV
FVLGAGVDAILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQAL
KNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVG
REELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAAL
DSGKLKGAMLDVFSQEPLPQESPLWRHPRVAMTPHIAAVTRPAEAIDYISRTITQLEKGE
PVTGQVDRARGY

NT seq 939 nt +upstreamnt +downstreamnt
atggagataattttttatcacccgacatttaacgccgcctggtgggtaaatgcgctggag
aaggctctcccacatgcgcgcgttcgtgaatggaaggtcggtgataacaaccccgcagac
tatgcgcttgtatggcagcccccggttgaaatgctggccggaagacgcttaaaagccgtc
tttgtgctgggcgcgggggtggatgcaattctgagtaaattaaatgcgcatccggaaatg
ctggacgcctccattcctctattccgtctggaagataccggaatgggcctgcaaatgcag
gagtatgccgtcagccaggtattacactggttccgtcgtttcgatgattatcaggcgctg
aaaaatcaggcgctatggaaaccgttgccggaatatacccgcgaagagtttagcgtcggt
atcatgggcgcaggggtactgggcgcaaaagtggcagaaagtctacaggcgtgggggttc
ccgttacgttgctggagtcgtagccgcaaatcctggcctggcgtggaaagttatgtaggg
cgtgaagagctgcgcgctttcctgaaccagacgcgggtgctgattaatctgctgccgaat
acggcccaaacggtaggaattattaatagcgaattgttggatcaattgccggatggcgct
tacgtgctgaatctcgcgcgcggcgttcatgttcaggaggcggatctgctggctgcgctt
gatagcggtaagctaaaaggcgcgatgttggatgtctttagccaggaaccgttaccgcag
gaaagtccattatggcgccatccgcgagtcgccatgacgccgcacattgcggcagtcacc
cgtccggcggaagccatcgattatattagccgcaccattacccagctggagaagggagag
ccggtgacggggcaggtggatcgggcgagaggatattga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)

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