KEGG   Sulfurisphaera tokodaii: STK_24590
Entry
STK_24590         CDS       T00062                                 
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
sto  Sulfurisphaera tokodaii
Pathway
sto03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sto00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    STK_24590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sto03019]
    STK_24590
   03009 Ribosome biogenesis [BR:sto03009]
    STK_24590
Messenger RNA biogenesis [BR:sto03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     STK_24590
Ribosome biogenesis [BR:sto03009]
 Prokaryotic type
  rRNA helicases
   STK_24590
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 T4SS-DNA_transf AAA_22 DEAD_2 SecA_DEAD
Other DBs
NCBI-ProteinID: BAB67570
UniProt: Q96XQ7
Structure
Position
complement(2459872..2460885)
AA seq 337 aa
MNEKIEQAIREMGFKNFTEVQSKTIPLMLQGKNVVVRAKTGSGKTAAYAIPILELGMKSL
VVTPTRELTRQVASHIRDIGRYMDTKVAEVYGGMPYKAQINRVRNADIVVATPGRLLDLW
SKGVIDLSSFEIVIIDEADLMFEMGFIDDIKIILAQTSNRKITGLFSATIPEEIRKVVKD
FITNYEEIEACIGLANVEHKFVHVKDDWRSKVQALRENKDKGVIVFVRTRNRVAKLVRLF
DNAIELRGDLPQSVRNRNIDAFREGEYDMLITTDVASRGLDIPLVEKVINFDAPQDLRTY
IHRIGRTGRMGRKGEAITFILNEYWLEKEVKKVSQKA
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgaatgaaaaaatagaacaagcaattagagaaatgggtttcaaaaattttacagaagtt
caatcaaaaacaattcctttgatgttacaaggaaaaaatgttgtagtgagagcaaaaact
ggaagcgggaaaactgcagcttatgctataccaattcttgagctaggaatgaaaagttta
gtagtaacacctacaagagaactaacaagacaagtggcctctcacatcagagatatagga
agatatatggatactaaagttgcggaagtttatggcggaatgccatacaaagcacaaatc
aatagagttagaaatgctgatattgttgtagctactcccggaaggttgcttgacttgtgg
agtaagggtgtcattgatctatcatcttttgaaattgtgataattgatgaagctgacttg
atgtttgaaatgggttttattgatgacataaagataatcttagctcaaacgagcaacagg
aagattaccggactattttcagctactataccagaggaaataagaaaagtagtgaaagat
ttcattactaactatgaagaaatagaggcttgtattggattggcaaacgtagaacataaa
tttgttcacgtaaaggacgattggagaagtaaagttcaagctctaagagagaataaagat
aaaggtgttatagtcttcgtaagaacaagaaacagagttgcaaaactagttaggttattt
gataacgctatagagttaagaggagatttaccacaaagtgtcagaaatagaaatattgat
gcatttagagaaggagaatatgacatgttaataactactgatgtggcgtctagaggttta
gatattccactggtagaaaaagtaataaattttgacgcaccacaggatttaagaacctat
atacacagaatcggaaggactggaagaatgggaaggaaaggtgaggcaataacttttata
ttaaatgagtattggttggagaaagaggttaagaaagttagtcagaaagcgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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