KEGG T00504: Strop

Salinispora tropica: Strop_3690

Entry

Strop_3690 CDS T00504

Gene name

kgd

Definition

alpha-ketoglutarate decarboxylase (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

stp Salinispora tropica

Pathway

stp00020	Citrate cycle (TCA cycle)
stp00310	Lysine degradation
stp00380	Tryptophan metabolism
stp01100	Metabolic pathways
stp01110	Biosynthesis of secondary metabolites
stp01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:stp00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:stp00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:stp00380]

SSDB

Motif

Pfam:

E1_dh Transket_pyr 2-oxoacid_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

4230757..4234569

AA seq 1270 aa
MCPGAPGVRRNPQTRVKEAILAVSTQQTSQENPLAGFGPNEWIVEEMYQRYLTDPTSVDP
AWHDFFADYRPTPDTGGTGDGEPAAKPEPDGRPEPSTAKPASTPERKSVSTKATPSKPAT
KPAAAKPATAKPAAAKPTTKPAATKPAATPTSSGPQTAPLRGVAAKIVQNMDASLSVPTA
TSVRAVPAKLLVDNRIVINNHLARGRGGKVSFTHLVGYALVRALAMHPEMNNSFATVDGK
PTLVRPEHVNLGIAIDLVKPDGSRNLVVPSIKACEQLDFRQFWQAYEDVVRRARKNELTM
EDYGGTTISLTNPGGIGTVHSMPRLMTGQSAIIGVGAMEYPAPYQGMSEGTLAELAVSKV
ITLTSTYDHRIIQGAQSGEFLKVMHEVLLGEHGFYDEIFTSLRIPYEPVRWMRDVAIDGE
GQINKTARVHELIHAYRVRGHLMADTDPLEFKIRKHPDLDVLQHGLTLWDLDRHFPVNGF
ANRQRMKLRDVLGVLRDTYCRRVGIEYMHVQDPEERRWIQQRVERKYEKPAVNEQKHVLN
RLNAAEAFETFLQTKYVGQKRFSLEGGESLIPLLGEVLEASAEGGLDEVVIGMAHRGRLN
VLANIVGKPYEKIFSEFEGHLDPRSTQGSGDVKYHLGQNGKFTTPDGEHSVKVSVVANPS
HLEAVDPVLEGIVRAKQDRIDLKLEGYTVLPLAVHGDAAFAGQGVVAETLNLSQLRGYRT
GGTVHVVVNNQVGFTTPPEYSRSSLYSTDVARMIQAPIFHVNGDDPEAVVRVAQLAFEYR
QTFNKDVVIDLVCYRRRGHNEGDDPSMSNPEMYRIIDSKRSVRKLYTEELIGRGDITVED
AEELLRDYQAQLERVFKATRDAATAPRQLSRPKREDEPEPPVETATDADVIRAVGEAHLH
LPEGFTPHKRIQQLLDRRAKMASEGNIDWGFGEIIAFGALLHDGVTVRLAGQDSRRGTFV
QRHASVVDAETGEDYLPLESLTAGGERSRFFVHDSLLSEYAAMGFEYGYSVENVNALVCW
EAQFGDFVNGAQSVIDEFISSGEVKWGQRSAVTLLLPHGHEGQGPDHTSGRPERFLQLCA
EDNMRVAIPTTPANYFHLLRRQALSPKRKPLVVFTPKSLLRHRLCVSQVEDFTNGSFQPV
LLDGDAPAPEQVKRVLLCSGKVYYDLFQARQDRGVTDTAIIRVEQLYPMPIDEIRAALAR
YPNAVDFAWTQEEPANQGAWSFVALNMLEHLDGVRLRRISRPAAAAPAVGSAKMHDVELS
ALLDAALPRP

NT seq 3813 nt +upstreamnt +downstreamnt
gtgtgtccgggagctcccggcgttcggcgtaacccacaaactcgcgtgaaagaggcgata
ctggccgtgtcgacccagcagacctcgcaggagaacccactggcgggtttcggcccgaac
gagtggatcgtcgaagagatgtaccagcggtacctcaccgaccccaccagcgtcgacccg
gcctggcacgacttcttcgccgactaccgccccacaccggacacgggaggcacgggggat
ggcgagccggccgcgaagccggagcccgacggtcggccggaaccctccaccgccaagccc
gcctccaccccggagcgcaagtccgtgtcgaccaaggccacccccagcaagcccgccacc
aagccggctgccgccaagccggctaccgcgaagccggctgccgccaagcccaccaccaag
ccggctgccaccaagccggccgccacgccgacctcgtccggcccgcagaccgcgccgcta
cgcggggtcgctgcgaagatcgtccagaacatggacgcctcgttgagcgtgccgaccgcg
accagcgtgcgcgccgtcccggccaaactgctggtggacaaccgcatcgtgatcaacaac
cacctcgcccggggccgcggcgggaaggtcagcttcacccacctggtcgggtacgcactg
gtccgcgcgctggcgatgcacccggagatgaacaactccttcgccaccgtggacggcaaa
cccacgctggtccgccccgaacacgtcaacctcggaatcgcgatcgacctggtcaagccg
gacggcagccgcaacctggtggtgccctccatcaaggcctgcgagcagctggacttccga
cagttctggcaggcgtacgaagacgtggtccggcgggctcggaagaacgagctgaccatg
gaggactacggcggcaccaccatctcgctgaccaaccccggcggcatcggcacggtgcac
tcgatgccacgactcatgaccggccagagcgcgatcatcggcgtcggcgcgatggagtac
ccggcgccgtaccagggcatgagcgaaggcaccctcgccgaactggcggtcagcaaggtc
atcacgctgaccagtacctacgaccaccggatcatccagggtgcgcagtccggcgagttc
ctcaaggtgatgcatgaggtactcctcggcgaacacggcttctacgacgagatcttcacc
tcgctccgcatcccgtacgagccggtgcggtggatgcgggacgtcgcgatcgacggcgag
ggtcagatcaacaagaccgcccgggtccatgaactgatccacgcctaccgggtgcgtggc
cacctgatggccgacaccgacccgctcgagttcaagatccgcaagcacccggatctggac
gtcctccaacacgggctcaccctgtgggatctggaccgccatttcccggtgaacggtttc
gccaatcggcagcggatgaagttgcgcgatgtcctcggcgtgctccgcgacacgtactgc
cgccgggtcggcatcgagtacatgcacgtccaggacccggaggagcggcgctggatccag
caacgggtcgagcgcaagtacgagaagccggcggtcaacgagcagaagcacgtcctcaac
cggctgaatgccgcggaggcattcgagaccttcctccagaccaagtacgtcggccagaag
cgcttctcgttggaggggggcgagtcactgatcccgctgctcggcgaggtgttggaggcc
tctgccgaaggtgggctggacgaggtcgtcatcggcatggcgcaccggggccggctgaac
gtgttggccaacatcgtcggcaagccgtacgagaagatcttctccgagttcgaggggcac
ctggacccgcgctccacgcagggctccggcgacgtgaagtaccacctcgggcagaacggc
aagttcaccaccccggacggcgagcactcggtcaaggtctcggtggtggcgaacccgtcg
catctggaggccgttgacccggtgctggagggcatcgtccgggccaagcaggatcggatt
gacctcaagctggagggctacaccgtgctgccgctggcggtgcacggggacgcggccttc
gccggccagggagtcgtcgccgagacgctcaacctgtcccagctccgcggctaccgcacg
ggcggcacggtgcacgtggtggtcaacaaccaggtcggcttcaccaccccaccggagtac
agccgctccagcctctacagcaccgatgtggcccggatgatccaggccccgatcttccac
gtcaacggcgacgacccggaggccgtggtgcgggtcgcccagctggccttcgagtaccgg
cagacattcaacaaggatgtcgtcatcgacctggtctgctaccggcgacgcgggcacaac
gagggcgacgacccgtcgatgtcgaacccggagatgtaccggatcatcgactcgaagcga
tcggttcgcaagctctacaccgaggagctgatcgggcggggcgacatcaccgtggaggat
gcggaggagctgctgcgcgactaccaggcgcagctggagcgggtgttcaaggccacccga
gacgccgccaccgcaccccgtcagctcagccgcccgaagcgggaggacgagccggagcca
ccggtggagaccgccactgacgccgatgtcatccgggcggtcggcgaggcgcatctccac
ctgccggagggcttcaccccgcacaagcggatccagcagctgctcgaccggcgggccaag
atggccagcgagggcaacatcgactggggtttcggcgagatcatcgcgttcggcgcgctg
ctgcacgacggggtcaccgtccggctcgccggtcaggactcgcgccgcggcacgttcgtg
cagcggcacgcctccgtcgttgacgccgagaccggcgaggactacctgcccctggagtca
ctcaccgcaggcggtgagcggtcgcggttcttcgtgcacgactcgctcctgtccgagtac
gcggcgatgggcttcgaatacggctactcggtagagaacgtcaacgcactggtctgctgg
gaggcccagttcggcgacttcgtcaacggtgcccagtcggtgatcgacgaattcatctcc
tccggtgaggtgaagtggggtcagcgctccgcggtcacgctgctgctgccgcacggccac
gagggccagggcccggaccacacctccggccgcccggaacggttcctccagctctgcgcc
gaggacaacatgcgggtggccatcccgacgacgccggcgaactacttccacctgctgcgt
cgccaggccctgtcaccgaagcgcaagcccctcgtcgtcttcacgccgaagtccctgctg
cggcaccgactctgcgtctcgcaggtcgaggacttcaccaacggttccttccagccggtg
ctgctcgacggtgacgcccccgcgccggagcaggtgaagcgggtgctgctctgctcgggc
aaggtctactacgacctgttccaggctcggcaggatcgcggtgtcaccgataccgcgatc
atccgggtcgagcagctctacccgatgccgatcgacgagatccgggccgcgctcgcgagg
tacccgaacgcggtggacttcgcctggacccaggaggagccggccaaccagggtgcctgg
tcgtttgtcgcgctcaacatgctggagcacctggacggggtccggctgcgccgcatctcc
cgtccagcggcagccgccccggcggtcggctcggccaagatgcacgacgtcgagctctcc
gcccttctcgacgctgcactcccccgcccgtag

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-STP (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (35)   

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