KEGG T00504: Strop

Salinispora tropica: Strop_3813

Entry

Strop_3813 CDS T00504

Gene name

sucC

Definition

succinyl-CoA synthetase subunit beta (EC:6.2.1.5)

Orthology

K01903

succinyl-CoA synthetase beta subunit [EC:6.2.1.5]

Organism

stp Salinispora tropica

Pathway

stp00020	Citrate cycle (TCA cycle)
stp00640	Propanoate metabolism
stp00660	C5-Branched dibasic acid metabolism
stp01100	Metabolic pathways
stp01110	Biosynthesis of secondary metabolites
stp01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:stp00020]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:stp00640]
Metabolism; Carbohydrate metabolism; C5-Branched dibasic acid metabolism [PATH:stp00660]

SSDB

Motif

Pfam:

ATP-grasp_2 Ligase_CoA ATP-grasp_5 GARS_A ATP-grasp_4 CPSase_L_D2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(4367854..4369032)

AA seq 392 aa
MDLYEYQGRDLFERHGLPVLAGGVATTPEEARAIAERLGGRVVVKAQVKVGGRGKAGGVK
LTEGAEETVARATDILGMDIKGHTVHKVMITVTADVAEEYYFSYLLDRANRTFLCIASVA
GGMDIEQVAAETPEKVVKEPIDANTGVDVATARRIVTQAGFPAEVADQTVEIAVDLWKAF
VAEDATLVEVNPLAKTAEGGLLLLDAKVSLDENAAFRHPDHEALVDQAAVDPLEQAAKEK
DLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGERHGGVKPANFLDIGGGASAAVMANGLE
IVLSDPAVKSVFVNVFGGITACDAVANGIVQALALLEQRGEKVTRPLVVRLDGNNAEAGR
AILDGANNPLIQRVDTMDGAAERAAELAAAGV

NT seq 1179 nt +upstreamnt +downstreamnt
gtggacctgtacgagtaccaggggcgggacctgttcgagcggcatgggttgcccgtgctc
gccggcggcgtcgccacgaccccggaggaggcccgcgcgatcgccgaacgcctcggcggt
cgggtggtcgtcaaggcgcaggtgaaggtcggcggccggggcaaggccggcggggtgaag
ctgaccgagggcgcggaggagacggtggcccgggccaccgacatcctcggtatggacatc
aaggggcacaccgtccataaggtcatgatcacggtgaccgcggacgtggccgaggagtac
tacttctcctacctgctggaccgggcgaatcgcaccttcctctgcatcgccagtgtcgct
ggtgggatggacatcgagcaggtggccgccgagacgccggagaaggtcgtcaaggagccg
atcgacgcgaacaccggcgttgacgtggcgacggcccggcggatcgtcacgcaggccggg
ttcccggccgaggtcgccgaccagaccgtcgagatcgccgtggacctgtggaaggcgttc
gtcgccgaggacgcgacgctggttgaggtgaacccgctcgccaagaccgccgagggcggg
ctactcctgctcgatgccaaggtcagcctggatgagaacgccgcgttccgacacccggac
cacgaggcgctggttgaccaggccgcggtggaccccctggagcaggccgccaaggagaag
gacctcaactacgtcaagctcgacggtgaggttggcatcatcggcaacggtgctggactg
gttatgtcgaccctcgacgtggtcgcgtacgccggtgagcggcacggcggtgtgaagccg
gcgaacttcctcgacatcggtggcggtgcgagtgctgcggtcatggccaacggcctcgag
atcgtgctctccgatcccgcggtgaagagcgtcttcgtcaacgtcttcggtgggatcacc
gcctgtgacgcggtcgccaacggcatcgtgcaggcgctggccctgctcgagcagcggggc
gagaaggtcaccagaccgctggttgtccgcctcgacggcaacaacgcggaggccggtcgg
gcgattctcgacggcgcgaacaacccgctgatccagcgggtcgacacgatggatggtgcg
gccgagcgggccgccgagctggccgctgcgggggtctga

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-STP (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (31)   

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