KEGG   Salinispora tropica: Strop_4022
Entry
Strop_4022        CDS       T00504                                 
Name
(GenBank) DNA polymerase III, delta prime subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
stp  Salinispora tropica
Pathway
stp03030  DNA replication
stp03430  Mismatch repair
stp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:stp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Strop_4022
   03430 Mismatch repair
    Strop_4022
   03440 Homologous recombination
    Strop_4022
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:stp03032]
    Strop_4022
   03400 DNA repair and recombination proteins [BR:stp03400]
    Strop_4022
Enzymes [BR:stp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Strop_4022
DNA replication proteins [BR:stp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Strop_4022
DNA repair and recombination proteins [BR:stp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Strop_4022
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_22 Mg_chelatase AAA_5
Other DBs
NCBI-ProteinID: ABP56452
UniProt: A4XBZ5
Position
complement(4569679..4570962)
AA seq 427 aa
MPDVFADLVGQDEAVDVLRRAAADAAAVLRAGLPDLTAQSDPADPAPTFGSDPAQAGAAE
RAEREPGAGMTHAWIFTGPPGSGRSVAARAFAAALQCGHGSGCGACPGCHTTMAGTHADV
RLVVPDGLSIGVNEMRALVLRAASTPSGGRWQVVVIEDADRLTEAAGNALLKAVEEPPPR
TVFLLCAPSIHPDDISVTIRSRCRVVPLRQPAPAAVAEVLVRRDGVEPDVANWAAAAAQG
HVGRARRLARDPQARTRRDAVLAVPRQLTGVGAAIDAAAALIGAAEAEAAALVADTDAAE
RAALETALGAGGTGRRAASAFRGAAGQVKELERRQKSRATRAQRDALDRALVDLAGFYRD
ALTMALGAPVEPVHTDTATVAGAGARKWEADGALRRLEAVLACRAAIEANVKPRIAVEAM
MLALWKG
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgccagacgtctttgccgacctggtcggccaggacgaggcggtggacgtactgcggcgg
gccgcagcggacgccgccgccgtgctccgtgccgggctgcccgacctgacggctcagagc
gacccggctgacccggctcccaccttcggtagcgacccggcgcaggccggtgcagccgag
cgggcggagcgggaaccgggggcggggatgacgcatgcctggatcttcaccgggccgccc
gggtcgggtcggtcggtcgccgcgcgagccttcgccgctgccctccagtgcgggcacggc
agcggatgcggtgcctgccccggctgccacaccacgatggccggcacccacgccgatgtc
cggctggtggtaccggatgggctctccatcggtgtcaacgagatgcgcgccctggtgctt
cgcgccgccagcaccccctccggtgggcggtggcaggtggtggtcatcgaggatgcggac
cgcctcaccgaggccgccggtaacgccctgttgaaggcggtggaggagccacccccgcga
acggtcttcctgctctgcgcgccgtccatccaccccgacgacatctcggtgaccatccgg
tcgcgctgccgggtcgtacccctgcggcagcccgcaccggcggccgtcgccgaggtgctc
gttcggcgtgacggcgtcgagcccgacgtggcgaactgggcggccgccgcggcccagggg
cacgtcgggcgggctcggcggctggcccgcgacccgcaggcgcgtacccgccgggacgcg
gtgctcgcggtgccccgtcagctcaccggggtgggcgcggcgatcgacgctgccgccgca
ctgatcggggccgccgaggcggaggccgcggcgttggtggcggacaccgatgcggccgaa
cgggccgcgttggagacggccctcggcgcgggcggcaccggccggagagcggccagcgcg
ttccggggcgccgccgggcaggtcaaggagttggagcggcggcagaagtcccgggccacc
cgggcgcagcgggatgccctggaccgggcgctggtggatctcgccggcttctaccgggac
gcgctcacgatggcgctgggcgccccggtcgaaccggtacacaccgacaccgccacggtc
gccggggcgggtgcgcgcaagtgggaagccgacggcgcgctgcgtcgcctggaagcggtc
ctggcctgccgggccgcgatcgaggcgaacgtcaagccccggatcgccgtcgaggcgatg
atgctcgctctctggaagggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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