KEGG T00504: Strop

Salinispora tropica: Strop_4204

Entry

Strop_4204 CDS T00504

Definition

sigma-70 region 2 domain-containing protein

Orthology

K03088

RNA polymerase sigma-70 factor, ECF subfamily

Organism

stp Salinispora tropica

Class

SSDB

Motif

Pfam:

Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_24 HTH_23

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(4771231..4771884)

AA seq 217 aa
MGVTVRHAPQKASRPLTAADVQEPPGPPEDDLAARFRSGDEAALREAYDRFGRAVLHLAV
STLSNRSDAEDVTQATFVAAWLGRDTFDPTKGSLIGWLLGIGRRKVIDRMRATAREHRVV
ETVRQLPDPTPSRSDPDTVVDRLVVADELARLPGEQRRMLELAFFDDLTHHQIATMTGVP
LGTVKSHIRRGMQCLKRRWEVDGATHGPRPAGLSGAR

NT seq 654 nt +upstreamnt +downstreamnt
gtgggggttacagtcaggcatgccccacagaaggcgagccgtccgttgacggcggcggac
gtccaggagcccccgggcccaccggaggacgatctggctgcccgcttccgctccggcgat
gaggcggcgctgcgagaggcgtacgaccggtttggtcgagcggtgctgcacctggccgtg
agcacgctgtcgaaccgcagcgatgccgaggatgtgacgcaggcgacgttcgtagccgca
tggctggggcgggacaccttcgacccgacgaaggggtcgctgatcggctggctgctcggc
atcggtcggcgaaaggtgatcgatcgaatgcgggctaccgcccgggagcaccgggtggtc
gagacggttcgtcagcttcctgaccccaccccgagtcgctcggacccagacactgtggtc
gatcgactggtggtggccgacgagctggcgcgtctccccggcgagcaacgacgcatgctg
gagttggcgttcttcgacgacctgacccaccatcagatagcgaccatgaccggcgtgcca
ctcggcacggtgaagagtcacatccggcgcggcatgcagtgcctgaaacgcagatgggag
gtggacggtgcaacacatggaccacgaccggctggtctttctggcgctcggtga

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-STP (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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