KEGG   Salinispora tropica: Strop_4491Help
Entry
Strop_4491        CDS       T00504                                 

Definition
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
stp  Salinispora tropica
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:stp00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Strop_4491
Enzymes [BR:stp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Strop_4491
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Strop_4491
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
5081038..5081898
Genome map
AA seq 286 aa AA seqDB search
MPELPEVEALTVYLRQRAVGRRVDRLEISAINALKTYDPAITAAAGQPVVHAQRHGKFLD
LVLGADLHLVVHLARAGWLHFREEFSSRTPLRPGKGPVALRARLDDGSGFDLTEAGTQKS
LAVYLVTDPATVPGVARLGPDALAVDPATFADRLRSRKGQVKGVLTDQTVLAGVGNAYSD
EILHTARLSPFALTTRLTDEQLATLHAATRDVLGDAVSRSVGQRAAELKGEKRSGLRVHA
RTGLPCPVCGDTVREVSFADSSLQYCPGCQTGGKPLADRRLSRIVR
NT seq 861 nt NT seq  +upstreamnt  +downstreamnt
gtgcccgaactaccagaggtggaggcgctcaccgtctacctgcgccaacgcgccgtcggc
cgacgggtcgaccggctggagatctcggcgatcaacgccctgaagacgtacgacccggcg
atcacggccgcggccggccaaccggtcgtccacgcccagcgacacggcaagttcctcgac
ctggtgctcggcgctgacctgcacctggtcgttcacctggcccgcgccggctggctgcac
ttccgggaggagttctcgtcccgcaccccgctgcgccccggcaagggcccggtggcgctg
cgggcccgtctcgacgacggctccgggttcgacctgaccgaggccggcacccagaagagt
ctcgccgtctacctggtgaccgatccggcgacggtgcccggggtggcccgacttggtccg
gacgcgctcgccgtggacccggccaccttcgccgaccggctccgtagccgcaagggtcag
gtcaagggggtgctcaccgatcagacggtgctcgccggggtgggtaacgcgtactctgat
gagatcctgcacacggcgcgactgtcaccgttcgcgctgaccacccggctgaccgacgaa
caactcgccaccctgcacgcggccacccgggacgtgctcggcgacgcggtgtcccgatcg
gtggggcaacgggccgcggagctcaagggcgagaagcgctccggcctgcgggtgcacgcc
cgaaccgggttaccctgcccagtctgcggcgacacggtacgggaggtctcgttcgctgac
tccagcctccagtactgtccaggttgccagaccggcgggaagccactcgcggaccgacgg
ttgtctcgaattgtacggtga

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