KEGG   Sebaldella termitidis: Sterm_0179
Entry
Sterm_0179        CDS       T01123                                 
Name
(GenBank) beta-lactamase domain protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
str  Sebaldella termitidis
Pathway
str03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:str00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Sterm_0179
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:str03019]
    Sterm_0179
Messenger RNA biogenesis [BR:str03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Sterm_0179
SSDB
Motif
Pfam: RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Asparaginase_C Lactamase_B_6
Other DBs
NCBI-ProteinID: ACZ07064
UniProt: D1AKP8
Position
191369..193144
AA seq 591 aa
MKFNYVEGKKGDKAEKEEKTEKIEKNTKKGAASEKQAKEEKVYIIPLGGMEEVGKNMTAF
QYKDEIVIVDAGLTFPEDEHLGIDVIIPDFTYLENNKDKIKSLLLTHGHEDHIGAIPYLF
QKLGSTDITIYGGKLTLELAKAKFEKKDAVIPKMKVVKGRTKLKLSKYFSVEFISVTHSI
ADCYAICIKTPAGIIVHSGDFKVDLTPVDGEGFDFARLAQLGEEGVDLLLSDSTNAAIPG
FTPSEKSVGESLREEFGKAKGRIIIAAFASHIHRLQQIVDIAQIYNRKIAIDGRSMVKVF
DIASRLGYLKFPKNMIVDLHKSDKLPPEKAIILCTGTQGEPLAALSRIANGTHKYISLRE
GDTVIISATPIPGNEKAVYKNINHLLKKNANVVFEKVVGIHVSGHGCQEEQKIMLSLVKP
KFFMPVHGEYMMLKKHKELAVATGVESDNVILAENGNKIELTKSHCRVAGKVQSGMTLID
GFGIGDVGNIVLKDRQNLADDGIVIITVSQYKNGKFNKQIELVTRGFIYNRESENLILET
KELIKLELESIETKEIKEISKVKQLLKSKVGEFLYKKTNREPIILPIIMEV
NT seq 1776 nt   +upstreamnt  +downstreamnt
atgaaatttaattacgtggaaggtaagaaaggcgataaagccgaaaaagaagaaaaaaca
gaaaaaatagagaaaaatactaaaaaaggtgctgcttcagaaaagcaggccaaagaagaa
aaagtgtatataatacctctgggaggaatggaggaagtaggaaagaacatgactgcattt
cagtataaagatgaaatagtaatagtggatgcagggctgacattcccagaagacgaacat
ttgggaatagatgtaattattccggatttcacatatctggaaaataacaaagacaagata
aaatcattattgttaacacacgggcatgaggatcatataggagccataccatacctgttt
cagaaactgggaagtacagacataactatttacggcggaaagcttactttggaactggct
aaggccaagtttgaaaaaaaggatgcagtaataccgaaaatgaaagtagtaaaaggaaga
acaaaattaaagctttcaaagtatttttccgtggaattcataagtgttacgcacagtata
gcggactgctacgcaatctgcataaagacaccggcaggaataatagtacactcgggagat
tttaaggtagatttgacaccggtagacggggaaggatttgattttgcacgtttagcacag
ttaggtgaagaaggtgtggatcttttactttcagatagtaccaatgcagctattccaggg
tttacaccatctgaaaaaagtgttggtgaaagtctgagggaagaattcggaaaagctaag
ggaagaattataatagcagcttttgcatcacatatacacagattgcagcagatagtggat
atagctcagatatataacagaaaaatagcaattgacggaagaagtatggtaaaagtattt
gatatcgcatcaagacttggttatctgaaatttcctaaaaatatgatagtagaccttcat
aagtcagataagctgccgcctgaaaaggctattatactgtgtacgggaacacagggagaa
cctttagcggcactgtcaagaatcgctaatgggacacataaatatatttccctgagagaa
ggggatactgtaataatatcagctacacctataccaggaaatgaaaaggctgtttataaa
aatataaaccatctgctgaaaaagaatgcaaatgttgtatttgaaaaagtagtaggaata
cacgtttcgggacatggatgtcaggaagagcagaagataatgctgagtctggtaaagcct
aagttttttatgcccgttcacggtgagtatatgatgctgaaaaaacataaagaacttgct
gtagcaacaggagtagagtctgataatgttatattagcggaaaacggaaataaaatagag
cttacaaaatcacactgcagggtagcaggaaaagtacaaagcggaatgacactgatagac
ggtttcggaatcggagatgtaggaaatatagtcttaaaagacagacagaatctagcggat
gacggaatagtaataataacagtttcacaatataaaaacggaaaattcaataaacagata
gagctggtaacaagagggttcatatataacagagaatcagaaaatcttattcttgaaacc
aaggaacttataaagctggaattggaaagcatagagacaaaagagataaaagaaataagt
aaagttaagcaattgctgaaaagcaaagtgggagaatttttatataaaaagacaaacaga
gaaccgataattctgccgataataatggaggtttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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