KEGG   Streptomyces sp. CCM_MD2014: NI25_29405
Entry
NI25_29405        CDS       T04862                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
strd  Streptomyces sp. CCM_MD2014
Pathway
strd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:strd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NI25_29405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:strd03400]
    NI25_29405
DNA repair and recombination proteins [BR:strd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NI25_29405
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG HHH_5 UVR HHH HHH_2 GIY_YIG_domain RecR_HhH GIY_YIG_2
Other DBs
NCBI-ProteinID: AIV37095
UniProt: A0A0N6W610
Position
6642447..6644615
AA seq 722 aa
MADPSSYRPRPGSIPDSPGVYRFRDEHRRVIYVGKAKSLRQRLANYFQDLAHLHPRTRTM
VTTAASVEWTVVSTEVEALQLEYSWIKEYDPRFNVKYRDDKSYPYLAVTMNEEFPRVQVM
RGHKKKGVRYFGPYGHAWAIRDTVDLLLRVFPVRTCSTGVFKNAARTGRPCLLGYIGKCS
APCVGRITPDDHWDLADEFCDFMAGRTGTYLRRLERQMADAAEEMEYERAARLRDDIGAL
KKAMEKSAVVLADATDADLIAVAEDELEAAVQIFHVRGGRVRGQRGWVTDKVEEITTGAL
VEHALQQLYGEESGDAVPKEVLVPALPDPVEPVQQWLTERRGSGVSLRIPQRGDKKALME
TVQRNAQQALVLHKTKRASDLTTRSRALEEIAEALDLDSAPLRIECYDISHLQGDDVVAS
MVVFEDGLARKSEYRRFQIKGFEGQDDVRSMHEVITRRFRRYLAEKEKTGEWADGESLTD
GERHTGDGPHTGPGPHPGGEAGPAGRTAPDDGEALTHGPALKDDDGRPKRFAYPPQLVVV
DGGQPQVAAAQRALDELGIDDIAVCGLAKRLEEVWVPREDDPVVLPRTSEGLYLLQRVRD
EAHRFAITYQRTKRAKRFRAGPLDDVPGLGETRKQALIKHFGSVKRLRAATIDQICEVPG
IGRKTAETVAVALAGATPAGPAVNTATGEIMDDDDGAPETTADAPGEPVSAGTPDERRGQ
ER
NT seq 2169 nt   +upstreamnt  +downstreamnt
atggccgacccctccagctaccgccccaggccgggatcgatcccggactccccgggggtg
tacaggttccgtgacgagcaccgccgggtgatctacgtcggaaaggcgaagagcctgcgc
cagcgcctggcgaactacttccaggacctggcgcacctgcacccgcgcacccgcaccatg
gtcaccacggccgcgtccgtggagtggacggtggtgtccacggaggtcgaggccctccag
ctggagtactcctggatcaaggagtacgacccccggttcaacgtcaagtaccgcgacgac
aagagttacccgtacctcgcggtgacgatgaacgaggagttcccgcgcgtccaggtgatg
cgcggccacaagaagaagggcgtgcgctacttcgggccgtacgggcacgcctgggcgatc
cgcgacacggtcgacctcctgctgcgcgtcttcccggtgcgcacctgttccacgggcgtc
ttcaagaacgccgcccgcaccggccgcccctgtctgctcggctacatcggcaagtgctcc
gcgccctgcgtcggccggatcacgcccgacgaccactgggacctggccgacgagttctgc
gacttcatggccggccgcaccggcacctacctgcgccgcctggagcggcagatggccgat
gccgcggaggagatggagtacgagcgggcggcgcgcctgcgagacgacatcggggccctc
aagaaggccatggagaagagcgcggtcgtgctcgccgacgccaccgacgccgacctgatc
gcggtcgccgaggacgagctggaggcggccgtccagatcttccacgtgcgcggcggacgc
gtgcgcggtcagcgcggctgggtcaccgacaaggtggaggagatcaccaccggcgccctg
gtcgagcacgccctccagcagctgtacggcgaggagagcggggacgccgtgcccaaggag
gtcctggtccccgccctgcccgacccggtcgagcccgtccagcagtggctgaccgagcgc
cgggggtccggcgtttcgttgcgcatcccgcagcgcggcgacaagaaggcgctgatggag
accgtccagcgcaacgcccagcaggcactcgtcctgcacaagaccaagcgcgcctccgac
ctgacgacgcgctcgcgcgcgctcgaggagatcgccgaggccctcgacctcgacagcgcc
ccgctgcgcatcgagtgctacgacatctcgcacctccagggcgacgacgtcgtggcctcc
atggtcgtcttcgaggacgggctggcccggaagagcgaataccggcggttccagatcaag
ggcttcgagggacaggacgacgtccgttccatgcacgaggtcatcacccgccgcttccgc
cgctatctcgccgagaaggagaagaccggcgagtgggcggacggcgagtcgctcaccgac
ggcgagcggcacaccggcgacgggccgcacaccggccccgggccgcaccccggcggcgaa
gccggcccggccggccggaccgccccggacgacggcgaggcgctcacccacggcccggcg
ctcaaggacgacgacggccggcccaagaggttcgcctacccgccgcagctcgtcgtcgtc
gacggcggacagccgcaggtcgccgccgcccagcgggcgctggacgagctgggcatcgac
gacatcgccgtgtgcggtctcgccaagcgcctggaggaggtctgggtgccccgcgaggac
gacccggtcgtcctgccccgcaccagcgaaggcctctacctgctgcagcgggtccgcgac
gaggcccaccgcttcgcgatcacctatcagcgcaccaagcgcgccaaacgcttccgcgcc
gggccgctggacgacgtgcccggcctgggtgagacccgcaaacaggcgctgatcaagcac
ttcggttcggtgaagcggctgcgggcggcgacgatcgaccagatctgcgaggtgcccggc
ataggccgcaagaccgccgagaccgtggccgtggccctggccggcgccaccccggccggg
cccgccgtgaacacggcgaccggagagatcatggatgacgacgacggggcacccgagacg
acggcggatgccccgggggagcccgtgtccgcgggcaccccggacgaacgacgggggcag
gagagatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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