KEGG   Streptomyces sp. Mg1: M444_24620
Entry
M444_24620        CDS       T03958                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
strm  Streptomyces sp. Mg1
Pathway
strm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:strm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    M444_24620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:strm03400]
    M444_24620
Enzymes [BR:strm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     M444_24620
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     M444_24620
DNA repair and recombination proteins [BR:strm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     M444_24620
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS Auto_anti-p27 DZR
Other DBs
NCBI-ProteinID: AKL68074
UniProt: B4V5B7
Position
1:5621263..5622123
AA seq 286 aa
MPELPEVEVVRRGLERWVAGRTIEDVEVLHPRAVRRHPAGGVDFAARLRGETVGVPQRRG
KYLWLPLAGRDLSVLGHLGMSGQLLVQPADAPDEKHLRIRVRFDDAAGTELRFVDQRTFG
GLSLHDNTPDGLPDVIAHIARDPLDPLFDEAAYHLALRAKRSTVKRALLDQSLISGVGNI
YADEALWRARLHYERPTATLTRPLSAELLGHVRDVMNAALAVGGTSFDSLYVNVNGESGY
FDRSLDAYGREDEPCRRCGTPMRRRPWMNRSSYFCPRCQRPPRVVS
NT seq 861 nt   +upstreamnt  +downstreamnt
gtgcccgagctgcccgaagtcgaagtcgtccggcgcggactggagcgctgggtggcaggg
cggaccatcgaggacgtcgaggtgctgcacccgcgggccgtgcgcaggcaccccgccgga
ggcgtggacttcgccgcgcggctgcggggcgagaccgtcggagtgccccagcggcggggg
aagtacctctggctgcccctcgcggggcgggacctgtccgtgctcggccacctcggcatg
agcgggcagctgctcgtacagcccgccgacgcccccgacgagaagcacctgaggatccgg
gtccgtttcgacgacgccgccggcaccgagctccgcttcgtcgaccagcgcaccttcggc
gggctctcgctccacgacaacacccccgacgggctccccgacgtcatcgcccacatcgcg
cgcgaccccctggacccgctcttcgacgaggccgcctaccacctggcgctgcgtgccaag
cggagcaccgtcaaacgggccctgctggaccagtccctgatcagcggggtcggcaacatc
tacgcggacgaggcgctgtggcgcgcccggctgcactacgagcgccccaccgccaccctc
acccgccccctgagcgcggaactcctcgggcacgtacgggacgtgatgaacgcggccctc
gccgtgggcggcaccagtttcgacagcctctacgtcaacgtgaacggcgaatccgggtac
ttcgaccgctccctcgacgcctacgggcgggaggacgagccctgccggcgctgcggtacg
ccgatgcgccggcggccgtggatgaaccggtccagctacttctgcccgcgctgtcagcgg
ccgccgcgcgtggtgtcgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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