KEGG   Streptomyces sp. PAMC 26508: F750_0958Help
Entry
F750_0958         CDS       T02619                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
strp  Streptomyces sp. PAMC 26508
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:strp00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    F750_0958
   03410 Base excision repair
    F750_0958
   03420 Nucleotide excision repair
    F750_0958
   03430 Mismatch repair
    F750_0958
Enzymes [BR:strp01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     F750_0958
    6.5.1.6  DNA ligase (ATP or NAD+)
     F750_0958
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     F750_0958
DNA replication proteins [BR:strp03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    F750_0958
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     F750_0958
DNA repair and recombination proteins [BR:strp03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     F750_0958
   NER (nucleotide excision repair)
    Other NER factors
     F750_0958
   MMR (mismatch exicision repair)
    Other MMR factors
     F750_0958
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
Position
complement(965345..966880)
Genome map
AA seq 511 aa AA seqDB search
MLLARIALVSLEVAATSARTRKTALLAALFRDAEPDDVPVVIPYLAGRLPQGRLGIGWST
LRVPVTPAGEPTLTVAGTDAELSAIGALGGPGSQAARKERLTRLLGAATAQEQHFLRGLL
TGEVRQGALDAVAVDALADAAGAPRDEVRRAVMLAGSLGPVARTLLAEGPGALASFRLTV
GRPVQPMLAHTSRSVAEAIDRLGPCVVEEKLDGIRVQVHRDGPQVRVYTRALDDITDRLP
EVAAAVTRLRADRFILDGEAIALGADGRPRPFQETAGRVGSRRDVATAADAVPVVPVFFD
VLSVDGRDLLDLPLSERHRDLASLVPEEMRVRRVAVEYPADERRRAAAVAFSEDTLARGH
EGVVVKGTAAPYSAGRRGASWLKVKPVHTLDLVVLAAEWGHGRRTGRLSNLHLGARRDDG
TFAMLGKTFKGLTDTMLSWQTQRLRELATGDDGHVVTVRPELVVEIAYDGLQSSTRYPEG
VTLRFARVLRYREDKSAEEADTVGTVLSRRG
NT seq 1536 nt NT seq  +upstreamnt  +downstreamnt
atgctgctcgccaggatcgccctcgtgtccctggaggtcgccgcgacctcggcccgcacc
cggaagaccgccctgctggccgcgctcttccgggacgccgagccggacgacgtccccgtc
gtgatcccgtatctcgccggccgcctcccgcaggggcgtctcgggatcgggtggagcacc
ctgcgcgtcccggtcaccccggccggcgaacccacgctgaccgtggcggggactgacgcc
gagctcagcgccatcggcgccctcggcggcccgggctcgcaggccgcacgcaaggagcgc
ctgacccgcctgctcggcgcggccaccgcgcaggagcagcacttcctgcgcggactgctc
accggggaggtgcgccagggagcactggacgccgtcgcggtcgacgccctggcggacgcc
gccggagcacctcgcgacgaggtccggcgcgccgtcatgctcgcagggtcgctgggaccc
gtcgcccgcacgctgctcgcggagggccccggagccctcgcctccttccggctcaccgtc
ggccggccggtccagcccatgctcgcccacacctcccgctcggtcgccgaggcgatcgac
cggctggggccctgtgtcgtcgaggagaagctggacggcatccgcgtccaggtgcaccgc
gacgggccacaggttcgcgtctacacccgcgctctcgacgacatcaccgaccggctcccc
gaggtcgccgctgcggtgacccgccttcgcgccgaccggttcatcctcgacggcgaggcg
atcgccctgggggcggacggcaggcccaggccgttccaggagaccgccggccgggtgggg
tcccgccgggacgtcgccaccgcggcggacgccgttccggtggtcccggtgttcttcgac
gtgctgtccgtggacggacgcgacctcctcgacctccccctctccgaacgtcaccgggat
ctggcttcgctggtccccgaggagatgcgcgtgcggcgcgtcgccgtggaatatcccgcg
gacgagcgccgacgggcggctgccgtggcgttctccgaggacaccctggcccgcggccac
gagggcgtggtggtcaaggggacggcggcgccctacagtgcgggccgccgcggcgcctcc
tggctgaaggtgaagcccgtgcacaccctggacctcgtcgtgctggccgccgaatggggc
cacggcagacgcaccggcaggctctccaacctgcatctgggagcacgcagggacgacggc
acgttcgcgatgctgggcaagaccttcaaagggctcacggacacgatgctcagctggcag
acgcaaaggctccgcgagctggccaccggcgacgacgggcacgtggtgacggtgcgcccc
gaactggtcgtggagatcgcctacgacgggctccagagctccacccgctacccggagggc
gtcacgctgcggttcgcccgcgtcctgcgctaccgcgaggacaagagcgccgaggaggcc
gacaccgtcggcacggtcctgtcccgccggggatga

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