KEGG   Streptomyces sp. PAMC26508: F750_6168Help
Entry
F750_6168         CDS       T02619                                 

Definition
ATP-dependent DNA ligase (EC:6.5.1.1)
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
strp  Streptomyces sp. PAMC26508
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:strp00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    F750_6168
   03420 Nucleotide excision repair
    F750_6168
   03430 Mismatch repair
    F750_6168
   03450 Non-homologous end-joining
    F750_6168
Enzymes [BR:strp01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     F750_6168
DNA repair and recombination proteins [BR:strp03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      F750_6168
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
6575829..6576839
Genome map
AA seq 336 aa AA seqDB search
MELDVDGRAVRLSNPDKVYFPEKGYTKKDVADYFQAVGPGILRALRERPTTLQRFVDGVE
GDFFYQKRAPKNLPDWTPTARIEFPSGRHADEMCPTELGAVLWAANLGTLTFHPWPVRRA
DTDHPDELRIDLDPQPGTDYADAVRAAHELRAVLDDHGLRGWPKTSGGRGIHVFVPLVPE
WTFTQVRRSAIAVGRELERRMPDRVTTAWWKEERGERIFVDYNQTARDRTIASAYSVRPF
PHAPVSAPLRWEEIDDAEPRDFDLRTMPARYAEAGDLHADMDDHAFRLDGLLELARRDEH
EHELGDLPYPPEYPKMPGEPKRVQPSRARRDDGDPA
NT seq 1011 nt NT seq  +upstreamnt  +downstreamnt
gtggagctggacgtggacggacgggccgtgcgcctgtccaacccggacaaggtgtacttc
cccgagaagggctacaccaagaaggacgtggccgactacttccaggccgtggggccgggg
atcctccgggccctgcgcgagcggcccaccacgctccagcgcttcgtcgacggtgtcgag
ggcgacttcttctaccagaagcgggcgccgaagaacctccccgactggacccccaccgcc
aggatcgagttccccagcggccggcacgccgacgagatgtgccccaccgaactcggagcc
gtcctctgggcggcgaacctgggcaccctgaccttccacccctggccggtgcgcagggcg
gacaccgaccaccccgacgaactgcgcatcgacctcgacccgcagcccggcacggattac
gccgatgcggtgagggcggcccacgaactgcgcgcggtcctggacgaccacggcctgcgc
ggctggcccaagacctccggcggccgcggcatccacgtcttcgtcccgctcgtccccgag
tggacgttcacccaggtcagacgctcggccatcgcggtggggcgggagctggagcgccgg
atgcccgaccgggtgaccaccgcctggtggaaggaggaacgcggcgagcggatcttcgtc
gactacaaccagacggcccgcgaccggaccatcgcctccgcctactccgtacgccccttc
ccgcacgcccccgtctccgccccgctgcgctgggaggagatcgacgacgccgagccccgc
gacttcgacctccggaccatgccggcgcggtacgcggaggccggcgacctgcacgccgac
atggacgaccacgccttccgcctcgacgggctgctcgaactggcccgacgcgacgagcac
gagcacgaactcggcgacctgccctatccgccggagtacccgaagatgccgggtgagccg
aaacgggtgcagcccagccgcgcccgccgcgacgacggtgacccggcatga

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