KEGG S.typhi: STY4077

Salmonella enterica subsp. enterica serovar Typhi CT18: STY4077

Entry

STY4077 CDS S.typhi

Gene name waaI, rfaI

Definition lipopolysaccharide 1,3-galactosyltransferase (EC:2.4.1.44)

Orthology K03278 UDP-D-galactose:(glucosyl)LPS
alpha-1,3-D-galactosyltransferase [EC:2.4.1.44]

Pathway sty00540 Lipopolysaccharide biosynthesis
sty01100 Metabolic pathways

Class Metabolism; Glycan Biosynthesis and Metabolism; Lipopolysaccharide
biosynthesis [PATH:sty00540]
Metabolism; Glycan Biosynthesis and Metabolism; Glycosyltransferases

SSDB

Motif Pfam: Glyco_transf_8 Glyco_transf_8N

Other DBs NCBI-GI: 16762592
NCBI-GeneID: 1250307
Sanger: STY4077
UniProt: Q8Z2G3

Position 3934610..3935623

AA seq 337 aa
MSRKYFEEEVIQQTLDYNYAQHSDANKFNIAYGIDKNFLFGCGVSIASVLIANREKALAF
HVFTDFFGPEDQQRFDALAKQYATQIVVYLIDCERLKSLPSTKNWTYATYFRFIIADYFS
DKTDRVLYLDADIACKGSIQELIDLNFAENEIAAVVAEGELEWWTKRSVSLATPGLVSGY
FNAGFILINIPLWTAENISKKAIEMLKDPEVVQRITHLDQDVLNILLVNKARFVDKKFNT
QFSLNYELKDSVINPVDAETVFVHYIGPTKPWHSWGAYPVSQYFLRAKSNSPWSHCALLN
PVTSHQLRYAAKHMFNQKHYTSGINYYIAYFKRKLLE

NT seq 1014 nt +upstreamnt +downstreamnt
atgagcagaaaatattttgaagaagaagtcattcaacagactttagattataactatgca
caacatagtgatgctaataaatttaatatagcttatgggattgataaaaactttcttttt
ggctgtggtgtctctattgcatcggttctcattgctaaccgtgagaaggcgttagctttc
catgtttttaccgatttctttggccctgaagatcagcagcgatttgatgcattagcaaaa
cagtacgctacgcagattgttgtttatctcattgactgtgagcgattaaaatcgctaccc
agtaccaaaaactggacctatgcaacatactttagattcattattgccgactatttttca
gataaaacagatagagtgctttatctggatgcagatattgcatgtaagggaagtattcag
gaacttattgatcttaatttcgctgaaaatgagattgcggcggttgttgctgaaggcgag
ttggagtggtggactaagcgctcggttagcctggcaacgcctgggttggtttctggctat
tttaatgccggttttattttaattaacatacctctttggaccgcagaaaatatctctaag
aaagcgattgaaatgctaaaagatccggaggtagtacagcgcataacgcaccttgatcag
gatgtattaaatatattgttagtgaataaagcgcgttttgttgataaaaaatttaatacg
caatttagtcttaactatgaattaaaagattcagttattaatccagttgatgctgagact
gtatttgttcattatatcggaccaacgaagccctggcatagttggggggcttaccccgtg
tcacaatattttttacgggctaagagcaactcaccatggtctcattgtgcacttttaaat
ccagtcactagccatcagttacgttatgcggcaaagcatatgtttaatcagaagcattat
acttcgggtataaattattatatagcctactttaaacgtaaacttcttgaataa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   SANGER-STY (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (17)

Salmonella typhimurium LT2: STM3718

Entry

STM3718 CDS S.typhimurium

Gene name rfaI

Definition lipopolysaccharide-alpha-1,3-D-galactosyltransferase (EC:2.4.1.44)

Orthology K03278 UDP-D-galactose:(glucosyl)LPS
alpha-1,3-D-galactosyltransferase [EC:2.4.1.44]

Pathway stm00540 Lipopolysaccharide biosynthesis
stm01100 Metabolic pathways

Class Metabolism; Glycan Biosynthesis and Metabolism; Lipopolysaccharide
biosynthesis [PATH:stm00540]
Metabolism; Glycan Biosynthesis and Metabolism; Glycosyltransferases

SSDB

Motif Pfam: Glyco_transf_8 Glyco_transf_8N

Other DBs NCBI-GI: 16767003
NCBI-GeneID: 1255242
UniProt: P19816

Position complement(3913515..3914528)

AA seq 337 aa
MSRKYFEEEVIQQTLDYNYAQHSDADKFNIAYGIDKNFLFGCGVSIASVLLANPEKALAF
HVFTDFFDSEDQQRFEALAKQYATQIVVYLIDCERLKSLPSTKNWTYATYFRFIIADYFS
DKTDRVLYLDADIACKGSIQELIDLNFAENEIAAVVAEGELEWWTKRSVSLATPGLVSGY
FNAGFILINIPLWTAENISKKAIEMLKDPEVVQRITHLDQDVLNIFLVNKARFVDKKFNT
QFSLNYELKDSVINPVDAETVFVHYIGPTKPWHSWGAYPVSQYFLQAKSNSPWSHCALLN
PVTSHQLRYAAKHMFNQKHYTSGINYYIAYFKRKLLE

NT seq 1014 nt +upstreamnt +downstreamnt
atgagcagaaaatattttgaagaagaagtcattcaacagactttagattataactatgca
caacatagtgatgctgataaatttaatatagcttatgggattgataaaaactttcttttt
ggctgtggtgtctctattgcatcggttctcctcgctaatccagagaaggcgttagctttc
catgtttttaccgatttctttgactctgaagaccagcagcgatttgaggcattagcaaaa
cagtacgctacgcagattgttgtttacctaatcgactgtgagcgcttaaaatcgctaccc
agtaccaaaaactggacctatgcaacatactttagattcattatcgccgattatttttca
gataaaacagatagagtactttatctggatgcagatattgcatgtaaggggagtattcag
gaacttattgatcttaattttgctgaaaatgagattgcggctgtcgttgctgaaggcgag
ttggaatggtggactaagcgctcggttagcctggcaacgcctgggctggtttctggctat
tttaatgccggttttattttaattaacatacctctttggactgcagaaaatatctctaag
aaagcgattgaaatgctaaaagatccagaggtagtacagcgcataacgcaccttgatcag
gatgtattaaatatatttttagtgaataaagcgcgttttgttgataaaaaatttaataca
caatttagtcttaactatgaattaaaagattcagttattaatccagttgatgctgagact
gtatttgttcattatatcggaccaacgaagccctggcatagttggggggcttaccccgtg
tcacaatattttttacaggctaagagcaactcaccatggtctcattgtgcacttttaaat
ccagtgactagccatcagttacgttatgcggcaaagcatatgtttaatcagaagcattat
acttcgggtataaattattatatagcctactttaaacgtaaacttcttgaataa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)

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