KEGG S.typhi: STY4081

Salmonella enterica subsp. enterica serovar Typhi CT18: STY4081

Entry

STY4081 CDS S.typhi

Gene name waaK, rfaK

Definition lipopolysaccharide 1,2-N-acetylglucosaminetransferase (EC:2.4.1.56)

Orthology K03280 UDP-N-acetylglucosamine:(glucosyl)LPS
alpha-1,2-N-acetylglucosaminyltransferase [EC:2.4.1.56]

Pathway sty00540 Lipopolysaccharide biosynthesis
sty01100 Metabolic pathways

Class Metabolism; Glycan Biosynthesis and Metabolism; Lipopolysaccharide
biosynthesis [PATH:sty00540]
Metabolism; Glycan Biosynthesis and Metabolism; Glycosyltransferases

SSDB

Motif Pfam: Glycos_transf_1 Glyco_tran_WecB

Other DBs NCBI-GI: 16762596
NCBI-GeneID: 1250311
Sanger: STY4081
UniProt: Q8Z2F9

Position 3938430..3939575

AA seq 381 aa
MIKKIIFTVTPIFSIPPRGAAAVETWIYQVAKRLSIPNAIACIKNAGYPEYNKINDNCDI
HYIGFSKVYKRLFQKWARLDPLPYSQRILNIRDKVTTQEDSVIVIHNSMKLYRQIRERNP
NAKLVMHMHNAFEPELPDTDAKIIVPSQFLKAFYEERLPAAAVSIVPNGFCAETYKRNPQ
DNLRQQLNIAEDATVLLYAGRISPDKGILLLLQAFKQLRTLRSNIKLVVVGDPYASRKGE
KAEYQKKVLDAAKEIGTDCIMAGGQSPDQMHNFYHIADLVIVPSQVEEAFCMVAVEAMAA
GKAVLASKKGGISEFVLDGITGYHLAEPMSSDSIINDINRALADKERHQIAEKAKSLVFS
KYSWENVAQRFEEQMKSWFDK

NT seq 1146 nt +upstreamnt +downstreamnt
atgattaaaaaaatcatatttactgttactcctatattttcaattcctcctcgtggcgcg
gctgcggtagaaacctggatttaccaggttgcaaaacgattatcaataccgaatgctatt
gcttgtataaagaatgccggctatcctgaatataataaaataaacgataactgtgatatt
cattacattgggtttagtaaagtttataagcgtctttttcagaaatgggctcgtctcgac
ccactaccctattcccagcgcatccttaatattagagataaagtgactacccaggaagat
agcgtcattgttattcataatagtatgaaactgtatcggcagatcagagagcgcaatccg
aatgcaaaactggttatgcacatgcataacgcatttgaaccagaacttcctgatacggat
gcaaaaattatcgtgcccagtcagtttcttaaagcgttttatgaagaaagattgcccgcc
gctgctgttagtattgtgcctaatggtttttgtgctgagacttataaaagaaacccacaa
gataatcttcgtcagcaattaaatattgcggaagatgccaccgttctcttatatgccggg
agaatttcgcctgataaaggcatcctgttgcttttgcaggcgttcaaacaattacgtacc
ttaagaagtaatattaaacttgtcgttgttggcgacccttatgcaagccgcaagggtgaa
aaagcagagtatcaaaagaaagtactggacgccgcaaaagagattggaactgattgcatt
atggctggagggcaatcacctgaccagatgcataacttctatcatatagccgatctggtt
atcgtgccatctcaggttgaagaagcattttgcatggtggctgtagaagcgatggcagca
ggaaaagcggttcttgccagcaaaaaaggggggattagcgaatttgtgttagatggcata
acgggctatcacctcgcagaacctatgtcgagcgacagtataattaatgatattaaccgt
gcgcttgctgataaggaacgccaccagattgccgaaaaagcaaaatccctggtgttttca
aaatacagttgggaaaatgtagcgcagcgtttcgaggaacaaatgaaaagctggtttgat
aagtga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   SANGER-STY (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (17)

Salmonella typhimurium LT2: STM3714

Entry

STM3714 CDS S.typhimurium

Gene name rfaK

Definition putative hexose transferase (EC:2.4.1.56)

Orthology K03280 UDP-N-acetylglucosamine:(glucosyl)LPS
alpha-1,2-N-acetylglucosaminyltransferase [EC:2.4.1.56]

Pathway stm00540 Lipopolysaccharide biosynthesis
stm01100 Metabolic pathways

Class Metabolism; Glycan Biosynthesis and Metabolism; Lipopolysaccharide
biosynthesis [PATH:stm00540]
Metabolism; Glycan Biosynthesis and Metabolism; Glycosyltransferases

SSDB

Motif Pfam: Glycos_transf_1 Glyco_tran_WecB

Other DBs NCBI-GI: 16766999
NCBI-GeneID: 1255238
UniProt: P26470

Position complement(3909561..3910706)

AA seq 381 aa
MIKKIIFTVTPIFSIPPRGAAAVETWIYQVAKRLSIPNAIACIKNAGYPEYNKINDNCDI
HYIGFSKVYKRLFQKWTRLDPLPYSQRILNIRDKVTTQEDSVIVIHNSMKLYRQIRERNP
NAKLVMHMHNAFEPELPDNDAKIIVPSQFLKAFYEERLPAAAVSIVPNGFCAETYKRNPQ
DNLRQQLNIAEDATVLLYAGRISPDKGILLLLQAFKQLRTLRSNIKLVVVGDPYASRKGE
KAEYQKKVLDAAKEIGTDCIMAGGQSPDQMHNFYHIADLVIVPSQVEEAFCMVAVEAMAA
GKAVLASKKGGISEFVLDGITGYHLAEPMSSDSIINDINRALADKERHQIAEKAKSLVFS
KYSWENVAQRFEEQMKNWFDK

NT seq 1146 nt +upstreamnt +downstreamnt
atgattaaaaaaatcatatttactgttactcctatattttcaattcctcctcgtggtgcg
gctgcggtagaaacctggatttaccaggttgcaaaacgactatcaataccgaatgctatt
gcttgtataaagaatgctggctatcctgaatataataaaataaacgataactgtgatatt
cattacatcgggtttagtaaagtttataagcgtctttttcagaaatggactcgtctcgac
ccactaccctattcccagcgcatccttaatattagagataaagtgactacccaggaagat
agcgtcattgttattcataatagtatgaaactgtatcggcagatcagagagcgcaatccg
aatgcaaaactggttatgcacatgcataatgcatttgaaccagaacttcctgataatgat
gcaaaaattatcgtgcccagtcagtttcttaaagcgttttatgaagaaagattgcccgcc
gctgctgttagtattgtgcctaatggtttttgtgctgagacttataaaagaaacccacaa
gataatcttcgtcagcaattaaatattgcggaagatgccaccgttctcttgtatgccggg
agaatttcgcctgataaaggcatcctgttgcttttgcaggcgttcaaacaattacgtacc
ttaagaagtaatattaaacttgtcgttgttggcgacccttatgcaagccgcaagggtgaa
aaagcagagtatcaaaagaaagtactggacgccgcaaaagagattggaacggattgtatt
atggctggggggcaatctcctgaccagatgcataacttctatcatatagccgatctggtt
attgtgccatctcaggttgaagaagcattttgcatggtggctgtagaagcgatggcagca
ggaaaagcggttcttgccagcaaaaaaggggggattagcgaatttgtgttagatggcata
acgggctatcacctcgcagaacctatgtcgagcgacagtataattaatgatattaaccgt
gcgcttgctgataaggaacgccaccagattgccgaaaaagcaaaatccctggtgttttca
aaatacagttgggaaaatgtagcgcagcgtttcgaggaacaaatgaaaaactggtttgat
aagtga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)

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