KEGG S.typhi: STY4082

Salmonella enterica subsp. enterica serovar Typhi CT18: STY4082

Entry

STY4082 CDS S.typhi

Gene name waaL, rfaL, rfbT

Definition hypothetical protein

Orthology K02847 O-antigen ligase [EC:6.-.-.-]

Pathway sty00540 Lipopolysaccharide biosynthesis
sty01100 Metabolic pathways

Class Metabolism; Glycan Biosynthesis and Metabolism; Lipopolysaccharide
biosynthesis [PATH:sty00540]

SSDB

Motif Pfam: Wzy_C

Other DBs NCBI-GI: 16762597
NCBI-GeneID: 1250312
Sanger: STY4082
UniProt: Q8Z2F8

Position complement(3939632..3940846)

AA seq 404 aa
MLTTSLTLNKEKWKPIWNKALVFLFVATYFLDGITRYKHLIIILMVITAIYQVSRSPKSF
PPLFKNSVFYSAAVLSLILVYSILISPDMKESFKEFENTVLEGFLLYTLLIPVLLKDETK
ETIAKIVLFSFLTSLGLRCLAESILYIEDYNKGIMPFISYAHRHMSDSMVFLFPALLNIW
LFRKNSIKLVFLVLSAIYLFFILGTLSRGGWLAVLIVGVLWAILNRQWKLIGVGAILLAI
IGALVITQHTNKPDPEHLLYKLQQTDSSYRYTNGTQGTAWILIQENPIKGYGYGNDVYDS
VYNKRVVDYPTWTFKESIGPHNTILYIWFSAGILGLASLAYLYGAIIRETASSTFRKVEI
SPYNAHLLLFLSFVGFYIVRGNFEQVDIAQIGIITGFLLALRNR

NT seq 1215 nt +upstreamnt +downstreamnt
atgctaaccacatcattaacgttaaataaagagaaatggaagccgatctggaataaagcg
ctggtttttctttttgttgccacgtattttctggatggtattacgcgttataaacatttg
ataatcatacttatggttatcaccgcgatttatcaggtctcacgctcaccgaaaagtttc
ccccctcttttcaaaaatagcgtattttatagcgcagcagtattatcattaatccttgtt
tattccatactcatatcgccagatatgaaagaaagtttcaaagaatttgaaaatacggta
ctggagggtttcttattatatactttattaattcccgtactattaaaagatgaaacaaaa
gaaacgattgcgaaaatagtacttttctcctttttaacaagtttaggacttcgctgcctt
gcagagagtattctgtatatcgaggactataataaagggattatgccattcataagctat
gcgcatcgacatatgtccgattccatggttttcttatttccagcattattgaatatttgg
ttgtttagaaaaaattcaattaagttggtttttttggtgcttagcgctatctaccttttc
tttatcctgggaaccctatcgcgagggggatggttggcagtgctcatagtaggtgttcta
tgggcaatactgaatcgccaatggaagttaataggagttggtgccattttattagccatt
atcggcgctttggttatcactcaacatactaacaaaccagacccagaacatttactttat
aaattacagcagacagatagctcatatcgttatactaacggaacccagggcaccgcgtgg
atactgattcaggaaaacccgatcaagggctacggctatggtaatgatgtgtatgatagt
gtttataataaacgcgttgtcgattatccaacgtggacctttaaagaatctatcggtccg
cataataccattctgtacatctggtttagtgcaggcatattgggtctggcgagcctggcc
tatttatatggcgctatcatcagggaaacagccagctctaccttcaggaaagtagagata
agcccctacaatgctcatctcttgctatttttatctttcgtcggtttttatatcgttcgt
ggcaattttgaacaggtcgatattgctcaaattggtatcattaccggttttctgctggcg
ctaagaaatagataa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   SANGER-STY (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (16)

Salmonella typhimurium LT2: STM3713

Entry

STM3713 CDS S.typhimurium

Gene name rfaL

Definition O-antigen ligase

Orthology K02847 O-antigen ligase [EC:6.-.-.-]

Pathway stm00540 Lipopolysaccharide biosynthesis
stm01100 Metabolic pathways

Class Metabolism; Glycan Biosynthesis and Metabolism; Lipopolysaccharide
biosynthesis [PATH:stm00540]

SSDB

Motif Pfam: Wzy_C

Other DBs NCBI-GI: 16766998
NCBI-GeneID: 1255237
UniProt: P26471

Position 3908290..3909504

AA seq 404 aa
MLTTSLTLNKEKWKPIWNKALVFLFVATYFLDGITRYKHLIIILMVITAIYQVSRSPKSF
PPLFKNSVFYSVAVLSLILVYSILISPDMKESFKEFENTVLEGFLLYTLLIPVLLKDETK
ETVAKIVLFSFLTSLGLRCLAESILYIEDYNKGIMPFISYAHRHMSDSMVFLFPALLNIW
LFRKNAIKLVFLVLSAIYLFFILGTLSRGAWLAVLIVGVLWAILNRQWKLIGVGAILLAI
IGALVITQHNNKPDPEHLLYKLQQTDSSYRYTNGTQGTAWILIQENPIKGYGYGNDVYDG
VYNKRVVDYPTWTFKESIGPHNTILYIWFSAGILGLASLVYLYGAIIRETASSTLRKVEI
SPYNAHLLLFLSFVGFYIVRGNFEQVDIAQIGIITGFLLALRNR

NT seq 1215 nt +upstreamnt +downstreamnt
atgctaaccacatcattaacgttaaataaagagaaatggaagccgatctggaataaagcg
ctggtttttctttttgttgccacgtattttctggatggtattacgcgttataaacatttg
ataatcatacttatggttatcaccgcgatttatcaggtctcacgctcaccgaaaagtttc
ccccctcttttcaaaaatagcgtattttatagcgtagcagtattatcattaatccttgtt
tattccatactcatatcgccagatatgaaagaaagtttcaaggaatttgaaaatacggta
ctggagggcttcttattatatactttattaattcccgtactattaaaagatgaaacaaaa
gaaacggttgcgaaaatagtacttttctcctttttaacaagtttaggacttcgctgcctt
gcagagagtattctgtatatcgaggactataataaagggattatgccattcataagctat
gcgcatcgacatatgtccgattccatggttttcttatttccagcattattgaatatttgg
ctgtttagaaaaaatgcaattaagttggtttttttggtgcttagcgccatctaccttttc
tttatcctgggaaccctatcgcgaggggcatggttggcggtgcttatagtaggtgttctg
tgggcaatactgaaccgccaatggaagttaataggagttggtgccattttattagccatt
atcggcgctttggttatcactcaacataataacaaaccagacccagaacatttactgtat
aaattacagcagacagatagctcatatcgttatactaacggaacccagggcaccgcgtgg
atactgattcaggaaaacccgatcaagggctacggctatggtaatgatgtgtatgatggt
gtttataataaacgcgttgtcgattatccaacgtggacctttaaagaatctatcggtccg
cataataccattctgtacatctggtttagtgcaggcatattgggtctggcgagcctggtc
tatttatatggcgctatcatcagggaaacagccagctctaccctcaggaaagtagagata
agcccctacaatgctcatctcttgctatttttatctttcgtcggtttttatatcgttcgt
ggcaattttgaacaggtcgatattgctcaaattggtatcattaccggttttctgctggcg
ctaagaaatagataa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)

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