KEGG   Staphylococcus aureus subsp. aureus 71193 (MSSA): ST398NM01_0544
Entry
ST398NM01_0544    CDS       T02043                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
sud  Staphylococcus aureus subsp. aureus 71193 (MSSA)
Pathway
sud03030  DNA replication
sud03430  Mismatch repair
sud03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sud00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ST398NM01_0544
   03430 Mismatch repair
    ST398NM01_0544
   03440 Homologous recombination
    ST398NM01_0544
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sud03032]
    ST398NM01_0544
   03400 DNA repair and recombination proteins [BR:sud03400]
    ST398NM01_0544
Enzymes [BR:sud01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ST398NM01_0544
DNA replication proteins [BR:sud03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ST398NM01_0544
DNA repair and recombination proteins [BR:sud03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ST398NM01_0544
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA RuvB_N AAA_30 AAA_19 DNA_pol3_gamma3 AAA_5 TIP49 AAA_22 AAA_16 AAA_14 PIF1 Mg_chelatase AAA_assoc_2 AAA_18 TniB AAA_7 nSTAND3 ResIII AAA_24 T2SSE TsaE RNA_helicase
Other DBs
NCBI-ProteinID: AFH68773
Position
445779..447476
AA seq 565 aa
MNYQALYRMYRPQSFEDVVGQEHVTKTLRNAISKEKQSHAYIFSGPRGTGKTSIAKVFAK
AINCLNSTDGEPCNECHICKGITQGTNSDVIEIDAASNNGVDEIRNIRDKVKYAPSESKY
KVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTEPHKIPPTIISRAQRFDFKAISL
DQIVERLKFVADAQQIECEDEALAFIAKASEGGMRDALSIMDQAIAFGDGTLTLQDALNV
TGSVHDEALDHLFDDIVQGDVQASFKKYHQFITEGKEVNRLINDMIYFVRDTIMNKTSEK
DTEYRALMNLELDMLYQMIDLINDTLVSIRFSVNQNVHFEVLLVKLAEQIKGQPQVIASV
AEPAQIASSPNTDVLLQRMEQLEQELKTLKAQGVSVAPTQKSSKKPARGIQKSKNAFSMQ
QIAKVLDKANKADIKLLKDHWQEVIDHAKNNDKKSLVSLLQNSEPVAASEDHVLVKFEEE
IHCEIVNKDDEKRSSIESVVCNIVNKNVKVVGVPSDQWQRVRTEYLQNRKNEGDDMPKQQ
AQQTDIAQKAKDLFGEETVHVIDEE
NT seq 1698 nt   +upstreamnt  +downstreamnt
ttgaattatcaagccttatatcgtatgtacagaccccaaagtttcgaggatgtcgtcgga
caagaacatgtcacgaagacattgcgcaatgcgatttcgaaagaaaaacagtcgcatgca
tatatttttagtggtccgagaggtacggggaaaacgagtattgccaaagtgtttgctaaa
gcaatcaactgtttaaatagcactgatggagaaccttgtaatgaatgtcatatttgtaaa
ggcattacgcaggggactaattcagatgtgatagaaattgatgctgctagtaataatggc
gttgatgaaataagaaatattagagacaaagttaaatatgcaccaagtgaatcgaaatat
aaagtttatattatagatgaggtgcacatgctaacaacaggtgcttttaatgccctttta
aagacgttagaagaacctccagcacacgctatttttatattggcaacgacagaaccacat
aaaatccctccaacaatcatttctagggcacaacgttttgattttaaagcaattagccta
gatcaaattgttgaacgtttaaaatttgtagcagatgcacaacaaattgaatgtgaagat
gaagccttggcatttatcgctaaagcgtctgaagggggtatgcgtgatgcattaagtatt
atggatcaggctattgctttcggcgatggcacattgacattacaagatgccctaaatgtt
acgggtagcgttcatgatgaagcgttggatcacttgtttgatgatattgtacaaggtgac
gtacaagcatcttttaaaaaataccatcagtttataacagaaggtaaagaagtgaatcgc
ctaataaatgatatgatttattttgtcagagatacgattatgaacaaaacatctgagaaa
gatactgagtatcgagcactgatgaacttagaattagatatgttatatcaaatgattgat
cttattaatgatacattagtgtcgattcgttttagtgtgaatcaaaacgttcattttgaa
gtgttgttagtaaaattagctgagcagattaagggtcaaccacaagtgattgcgagtgta
gctgaaccagcacaaattgcttcatcgccaaacacagacgtattgttgcaacgtatggaa
cagttagagcaagaactaaaaacactaaaagcacaaggagtgagtgtcgctcctactcaa
aaatcttcgaaaaagcctgcgagaggcatacaaaaatctaaaaatgcattttcaatgcaa
caaattgcaaaagtgctagataaagcgaataaggcagatatcaaattgttgaaagatcat
tggcaagaagtgattgatcatgccaaaaacaatgataaaaaatcactcgttagtttattg
caaaattcggaacctgtggcggcaagtgaagatcacgtacttgtgaaatttgaggaagag
atccattgtgaaatcgtcaataaagacgacgagaaacgtagtagtatagaaagtgttgta
tgtaatatcgttaataaaaacgttaaagttgttggtgtaccatcagatcaatggcaaaga
gttcgaacggagtatttacaaaatcgtaaaaacgaaggcgatgatatgccaaagcaacaa
gcacaacaaacagatattgctcaaaaagcaaaagatcttttcggtgaagaaactgtacat
gtgatagatgaagagtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (23)   
   Pfam (23)   
All databases (35)   

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