KEGG   Sulfurihydrogenibium sp. YO3AOP1: SYO3AOP1_1544
Entry
SYO3AOP1_1544     CDS       T00715                                 
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
sul  Sulfurihydrogenibium sp. YO3AOP1
Pathway
sul03030  DNA replication
sul03430  Mismatch repair
sul03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sul00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SYO3AOP1_1544
   03430 Mismatch repair
    SYO3AOP1_1544
   03440 Homologous recombination
    SYO3AOP1_1544
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sul03032]
    SYO3AOP1_1544
   03400 DNA repair and recombination proteins [BR:sul03400]
    SYO3AOP1_1544
Enzymes [BR:sul01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SYO3AOP1_1544
DNA replication proteins [BR:sul03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SYO3AOP1_1544
DNA repair and recombination proteins [BR:sul03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SYO3AOP1_1544
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: ACD67142
Position
1588074..1588685
AA seq 203 aa
MNSILERLSFYYKKKRLKNPKYSFLFEEPPENEYVAFDTETTGLNPKVDDILSIAAVKIK
DNKILLNERFNVIVKPDREINEDVIKIHGLRKKDLESGIPIEEAVDRFVHFIGSRPLVGY
YLEFDVAMINKYFKKLSGTTLPNKQIEVSALYYDYKIGLIPQGFVDLRFDSILKDLDIPT
FGKHDALNDAIMTALIFLKLKNK
NT seq 612 nt   +upstreamnt  +downstreamnt
atgaatagcatattagaaagattaagtttttactataagaaaaaacgattaaaaaatcca
aaatacagctttctgtttgaagagccaccggaaaatgagtatgtagcatttgatacagaa
actacaggtttaaatccaaaagttgatgatattttgtcaatcgcagcagtaaagataaaa
gataataaaatactattaaatgaaaggtttaacgtaattgttaaaccggatagagagatt
aacgaagatgtcattaaaattcacggacttagaaaaaaagaccttgaatccggtatacca
atagaagaagcagttgatagatttgtacattttataggaagcagaccacttgtaggttat
tacttagagtttgacgttgcaatgataaacaaatattttaaaaaactctccggaacaaca
ttgccaaacaaacagatagaagtatcagcactttattacgattacaaaatcggcttaatt
ccacagggatttgttgatttaagatttgattctatcctcaaagatttagacatacctacc
tttggaaaacatgatgctttaaacgatgccatcatgacagcactgatttttttaaagtta
aaaaataaataa

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