KEGG   Sulfolobus sp. A20: BFU36_05105
Entry
BFU36_05105       CDS       T04516                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
sula  Sulfolobus sp. A20
Pathway
sula03030  DNA replication
sula03410  Base excision repair
sula03420  Nucleotide excision repair
sula03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sula00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BFU36_05105
   03410 Base excision repair
    BFU36_05105
   03420 Nucleotide excision repair
    BFU36_05105
   03430 Mismatch repair
    BFU36_05105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sula03032]
    BFU36_05105
   03400 DNA repair and recombination proteins [BR:sula03400]
    BFU36_05105
Enzymes [BR:sula01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BFU36_05105
    6.5.1.6  DNA ligase (ATP or NAD+)
     BFU36_05105
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     BFU36_05105
DNA replication proteins [BR:sula03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    BFU36_05105
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     BFU36_05105
DNA repair and recombination proteins [BR:sula03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     BFU36_05105
   NER (nucleotide excision repair)
    Other NER factors
     BFU36_05105
   MMR (mismatch excision repair)
    Other MMR factors
     BFU36_05105
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Spore_Cse60
Other DBs
NCBI-ProteinID: AOL16192
UniProt: A0A1C8ZS26
Position
complement(920264..922078)
AA seq 604 aa
MQFKVIADYFDKLEKISSRLQLTALLSDLLSKADKENVDKVIYIIQGKLWPDFLGYPELG
IGEKFLIKAISIATNVKESEVEGLNKKLGDLGEVARMLKSKQQSSSILSFLNTGKTDEGL
SLEETYSTLSKIALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDATI
IDALAIAFGGGQNNSEIIERAYNVRADLGNIAKILMENGIEALKTVKPEAGIPIRPMLAE
RLSDPEEILKKVGGLALVDYKYDGERAQIHKDGNKIYIFSRRLENITSQYPDVVDYISEF
IDGDKFIIEGEIVAIDPESGEIRPFQELMHRKRKSDIHEAIKSYPVNVFLFDLMLYNDED
YTNRPLQDRRKILEAIVKNNDKVKIANHIMTDNVNVLKQFFYQAISDGTEGVMVKSLSKD
SIYQAGARGWLWIKLKRDYQSEMADTVDLVVIGGFYGKGKRGGKLSSLLMAAYNPSTDTF
DSVCKVASGFSDEQLDDLQKKLNEIKRQTKHPRVNSKMEPDVWVEPLYVAEIIGAEITLS
PLHSCCQDMIAKDSGLSIRFPRFIRWREDKGPEDATTTEEILEMYKRQLKKKVDTSQSEE
NANI
NT seq 1815 nt   +upstreamnt  +downstreamnt
atgcagtttaaagttatcgcagattattttgacaaattggaaaaaatttcctcaagattg
caattaacggccttactctctgatctgttaagcaaggctgacaaggaaaacgtagacaaa
gtaatttatattatccaaggaaaattatggccagacttcttgggttatccagaattaggt
attggagagaaattccttattaaggcaatcagtatagctactaatgttaaagagagtgaa
gtagaaggtttaaacaaaaagttaggagatcttggagaagtagctagaatgttaaagagt
aaacaacaatcctcttcaattttaagttttctgaatactggtaaaactgatgaaggattg
agtctagaagaaacttactctacgctaagtaagatagcattaacaactggcgaaggcagt
agagatttaaaaattaggttactggctggattgctaaaaaaggcagatccactagaagct
aaattcttagtaagattcgttgaaggcagactaagagttggaataggtgatgcaacaatt
atagatgctttagctattgcatttggaggtgggcaaaataattcagaaataatagaaaga
gcatataacgttagagctgacctaggtaacattgcaaaaattctaatggaaaacggcatt
gaagcattaaaaactgtcaagcctgaggcaggaattcctattagaccaatgttagcagaa
aggctctcagatccagaggaaatattgaaaaaagttggtggtttagccttagttgactat
aaatatgatggggaaagagctcaaatacacaaggatgggaataaaatctatatcttttcc
agaagattagaaaacataacctcacagtacccagatgtcgtagattacattagtgagttt
atagatggagacaagttcataattgagggtgagattgtagctatagatccagagagtgga
gaaattagaccatttcaagagctaatgcatagaaagagaaaatctgatattcatgaagct
attaagagttacccggttaacgtgtttttatttgacctaatgctatataacgacgaagat
tatactaatagacctttgcaagatcgaaggaaaattttagaagctattgtaaaaaataat
gataaagtaaaaatagctaaccatatcatgacggataatgtaaatgtattgaaacaattc
ttttatcaagcaatatctgatggaacagaaggggtgatggttaaatccttaagtaaagat
tcgatttatcaagctggagctagaggatggctatggataaagttaaagcgtgactaccag
agtgaaatggctgacacggtagatttagtagtaataggaggtttctacggaaaaggcaaa
agaggtggaaaattaagttcattattgatggcagcttacaatccatccactgatactttt
gattcagtatgcaaggtagctagtggattctctgatgaacaactagatgatttacaaaag
aaattgaatgagataaagaggcaaaccaaacatcctagagtaaattctaaaatggagcct
gacgtgtgggtagagccattatatgtagcggaaataataggtgccgagataacactctct
cccttacattcatgttgccaagatatgatagctaaagattctggattatcaatcagattt
cctagattcataagatggagagaagataaaggtccagaggatgctactacaactgaagag
atcttagagatgtataagagacagttaaagaaaaaggtagatactagccagtcagaagaa
aacgctaatatttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (7)   
   KEGG ENZYME (3)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

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