KEGG   Sulfurospirillum diekertiae JPD-1: SJPD1_0525
Entry
SJPD1_0525        CDS       T05109                                 
Name
(GenBank) arginin-tRNA ligase
  KO
K01887  arginyl-tRNA synthetase [EC:6.1.1.19]
Organism
sulj  Sulfurospirillum diekertiae JPD-1
Pathway
sulj00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:sulj00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SJPD1_0525
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sulj01007]
    SJPD1_0525
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sulj03016]
    SJPD1_0525
   03029 Mitochondrial biogenesis [BR:sulj03029]
    SJPD1_0525
Enzymes [BR:sulj01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.19  arginine---tRNA ligase
     SJPD1_0525
Amino acid related enzymes [BR:sulj01007]
 Aminoacyl-tRNA synthetase
  Class I (G)
   SJPD1_0525
Transfer RNA biogenesis [BR:sulj03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    SJPD1_0525
 Prokaryotic type
   Other AARSs
    SJPD1_0525
Mitochondrial biogenesis [BR:sulj03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    SJPD1_0525
SSDB
Motif
Pfam: DALR_1 tRNA-synt_1d Arg_tRNA_synt_N tRNA-synt_1e tRNA-synt_1 tRNA-synt_1g tRNA-synt_1f tRNA-synt_1b tRNA-synt_1c
Other DBs
NCBI-ProteinID: ATB68647
UniProt: A0A290HB07
Position
495762..497348
AA seq 528 aa
MKKSVIRAIKETLQREFVLEKPTNLSFGHYATPIAFSLAKELKKSPIAIAEEICQKFTIG
EIFQEVTPIKGYINFKLSESFLDQYATWTIQNEALFGSDEQNESILLEYVSANPTGPLHI
GHARGAVIGDALARIGKHLGYKITTEYYVNDAGNQVDLLGLSLYLSGREHILGFPVEWPE
EFYRGEYIIDLAHVASAELGKAIFEDEANIPLLSVWGKDKMLELIKSNLADVGIEFEQFV
SEKSLYNKWDESFAKLQKSDKTYTEGGKVWIRSTELGDEKDRVVVREDGRPTYLAGDIIY
HDNKFQRGYDSYINIWGADHHGYITRVKAAIHFLGYDEQKLEVILAQMVSLLKGGEPYKM
SKRAGNFILMSDVVNEVGSDALRFVFLSKKSDTHLEFDVDVFKQEDSNNPIFYINYAHAR
INQIFAKAEKTLADVQNVKLENLSEEAQNLLFSALLLPEVLEDTFSSRQVQKLTEYLKSL
AAALHKFYNENRVVGSEDEEKFLKLFAVVGLSLRVGLKLIGINAKDKM
NT seq 1587 nt   +upstreamnt  +downstreamnt
ttgaaaaaatcggttattcgtgctattaaagagacattgcaaagagagtttgttttagaa
aaacctaccaatctttcttttggtcattatgcaactcctatcgctttttctcttgctaaa
gagttaaaaaaatcgcctattgctattgctgaagagatttgtcaaaagtttactattgga
gaaatttttcaagaagttactccgattaaaggttatatcaattttaaactcagtgagagt
tttttagatcaatatgcgacatggaccattcaaaatgaggcactttttggatctgatgag
caaaatgaatctattttattagaatatgtgagtgcaaatcctacgggacctttacatatt
ggtcatgcaagaggtgctgtgattggtgatgcattggctcgtattggaaagcatttaggg
tataagattaccacagaatactatgtcaatgatgcaggtaatcaggttgatcttttaggt
ctttctctttatctctctggacgtgagcatattctaggttttccagtagagtggccagaa
gagttttatcgaggtgaatatattattgacctcgcccacgttgcttctgcagaattggga
aaagctatttttgaagatgaagccaatattccattgctctctgtttggggtaaagataag
atgctagaacttatcaagtctaatcttgccgatgttggtattgagtttgagcagtttgtc
agtgaaaagtcgctttataacaagtgggatgaaagcttcgccaaacttcaaaaaagtgat
aaaacttatactgaaggtggtaaagtttggattcgctctactgaactcggagatgaaaaa
gatcgcgttgttgttagagaagatggcagaccaacgtatttagcgggtgatattatctac
catgacaataaatttcaacgagggtatgatagctatatcaatatctggggtgctgatcac
catgggtatattacgcgtgtcaaagcggctattcattttttaggctatgatgagcaaaaa
cttgaagtgattttggcgcaaatggtttcacttttaaaaggtggtgaaccgtataaaatg
agcaaacgtgccggtaattttattttgatgagtgatgtggtgaatgaagtgggaagtgat
gctttacgttttgtattcctcagcaaaaagtccgatactcatcttgaatttgatgtggat
gtttttaaacaagaggacagtaacaatccaattttttatatcaactatgcacatgcgcga
atcaatcaaatttttgctaaagcagaaaagacacttgccgacgtacaaaatgttaagctc
gaaaatttaagtgaagaggctcaaaaccttctctttagtgcactgttattgccagaagtt
cttgaagatacctttagttctcgtcaagtacaaaaactgacagaatatcttaaatcactt
gctgccgctttacataaattttacaatgaaaatcgcgttgtaggtagtgaggatgaagaa
aaatttctcaaactctttgctgttgtaggactatcactgcgtgttgggctcaaacttata
ggtattaatgcaaaagataaaatgtaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

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