KEGG   Sulfurospirillum diekertiae JPD-1: SJPD1_1991
Entry
SJPD1_1991        CDS       T05109                                 
Name
(GenBank) DNA polymerase III subunit epsilon family exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
sulj  Sulfurospirillum diekertiae JPD-1
Pathway
sulj03030  DNA replication
sulj03430  Mismatch repair
sulj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sulj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SJPD1_1991
   03430 Mismatch repair
    SJPD1_1991
   03440 Homologous recombination
    SJPD1_1991
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sulj03032]
    SJPD1_1991
   03400 DNA repair and recombination proteins [BR:sulj03400]
    SJPD1_1991
Enzymes [BR:sulj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SJPD1_1991
DNA replication proteins [BR:sulj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SJPD1_1991
DNA repair and recombination proteins [BR:sulj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SJPD1_1991
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C RNase_H_2
Other DBs
NCBI-ProteinID: ATB70096
UniProt: A0A290HW82
Position
complement(1928011..1928814)
AA seq 267 aa
MRAVDSYIFKMTQKPIFHKEFFAKMHTFKELEPVDVEDLSMLKLLGLPITKYNNYAFTLE
TLTTPIGQGKFCIVDIEANGSKPALHQIIEIGAVMIENGKEVAEFSSLAKADILPDSIEQ
LTGITLAELQKAPSLTSVLEAFRLFIKDAVFVAHNVNFDYYFISYAMEQAGFGPLLNRRL
DTIDLARKCIEAPKYGLGALTDYLGIGFENHHRALYDARATAQVFFKALENLPEEVQTVE
QLIAFTNPQNQKKKKKEKPSKPTDTSL
NT seq 804 nt   +upstreamnt  +downstreamnt
gtgagagcagtagatagttatatttttaagatgacgcaaaagcctatttttcataaagaa
ttttttgccaaaatgcatacgtttaaagagttggaacctgtcgatgttgaagatctatca
atgctcaaactcttagggcttcctatcactaaatacaataattacgcttttaccctagaa
acgcttactacacccatcggtcagggaaaattttgcattgtcgatattgaagccaatggc
agtaaacccgctttacaccagattattgaaatcggtgcggtgatgattgaaaatggcaaa
gaagttgctgagttttcatccttggctaaggcggatattttacctgatagcattgagcaa
ctcacaggcattacccttgcggaacttcaaaaagcaccctcacttacgtctgttttagaa
gcatttcgcctgtttatcaaagatgccgtttttgttgcgcataatgttaattttgactac
tattttatctcttacgctatggagcaagcagggtttggtccgcttttgaatcgcagactt
gataccattgatttggcgcgaaaatgtattgaagcacctaagtatggtctaggggcgctt
acggactatttggggatagggtttgaaaatcaccatagagcattgtatgatgcacgcgct
acagcgcaagtgttctttaaagcgttggaaaatttacctgaagaggtgcaaaccgtagag
cagttaatcgcttttacgaatccacaaaaccaaaagaagaagaaaaaagagaagccttca
aagcctactgatacatcgctttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system