KEGG   Sulfurospirillum diekertiae JPD-1: SJPD1_2414
Entry
SJPD1_2414        CDS       T05109                                 
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
sulj  Sulfurospirillum diekertiae JPD-1
Pathway
sulj03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sulj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SJPD1_2414
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sulj03021]
    SJPD1_2414
   03400 DNA repair and recombination proteins [BR:sulj03400]
    SJPD1_2414
Enzymes [BR:sulj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SJPD1_2414
Transcription machinery [BR:sulj03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SJPD1_2414
DNA repair and recombination proteins [BR:sulj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SJPD1_2414
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RNA_pol_L_2
Other DBs
NCBI-ProteinID: ATB70510
UniProt: A0A1Y0HQN4
Position
complement(2342920..2343933)
AA seq 337 aa
MKKINTSAYMPTEIEVENIAANKVQISAYPFESGFAVTLAHPLRRLLLSSTVGSAPTAVK
IEGVTHEFDSMRGMLEDVALFIINLKNIRFKIKGDEKRVEVNYSFTGPKEIKGSDLANAQ
IEIVTPDAYLATINEDAEFNFSLILEKGIGYVPSENIRGLVGEDYIALDAFFTPVKRAVY
DIENVLVEDNPNYEKIVFTIETDGLVSPIEAFKNSLEAMYAQMSVFNGILDIAVAPKSES
SNESVELGKLLQSIEELNLSARSFNCLDRAEVKYIGELTLMSELELKNLKNLGKKSLEEI
RQVMEESGYPVGYNFSDDTASLLKKKIEDLKSEANEG
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgaaaaaaatcaatacatcagcttacatgccaactgaaattgaggtagaaaatattgct
gcaaataaggttcaaattagtgcatacccatttgaatctggttttgcggtaacattagca
catcctttacgtagattgcttttaagtagcacagtaggatctgcaccaacggctgtaaag
attgaaggcgtaacccatgaattcgatagcatgcgtggtatgcttgaagatgttgctctt
ttcatcattaatcttaaaaatattcgtttcaaaatcaaaggcgatgagaaacgtgtagag
gttaactactcatttactggaccaaaagagattaaaggaagtgacttagcaaatgcacaa
attgagattgttacgccagacgcatatttggcaacaattaatgaagatgcagaatttaac
ttttctttgattctcgaaaaaggaatcggctatgttccaagtgagaacattagaggttta
gtcggagaagattatatcgcacttgatgctttctttacacccgtaaaaagagcagtttac
gatattgagaatgttttggttgaagacaatcctaattacgaaaaaattgttttcacaatc
gaaacagatggacttgtttctccaatcgaagcttttaaaaattcacttgaagcgatgtat
gcacagatgtcagtatttaatggcattttagatattgcagtggctccaaagagtgagagt
tctaatgagagtgtagagctcggaaagctattacagagtattgaagagttaaatctgagt
gctcgtagcttcaactgcttagatagagcagaggttaaatatattggtgagcttactctg
atgagtgagttagaactcaaaaaccttaaaaatctaggtaaaaaatcgttagaagagatc
agacaagttatggaagagagtggttatcctgtcggatataatttctctgacgatacggca
agtttgctcaagaaaaaaattgaagatttaaaatctgaagccaacgagggttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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