KEGG   Streptococcus suis SS12: SSU12_1289Help
Entry
SSU12_1289        CDS       T02025                                 

Definition
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
suo  Streptococcus suis SS12
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:suo00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    SSU12_1289
Enzymes [BR:suo01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     SSU12_1289
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SSU12_1289
DNA repair and recombination proteins [BR:suo03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SSU12_1289
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
Position
complement(1317554..1318381)
Genome map
AA seq 275 aa AA seqDB search
MPELPEVETVRRGLNRLVKGKVISKVEVTYAPMIKTGVDAFCQDLIGQEILDVDRRGKYL
LIYLTDHVLISHLRMEGKYNFFADQVPANKHFHAFFTFIDGSTLVYQDVRKFGTMELLGK
ADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSKKPIKSHLLDQSLVAGLGNIYVDEVLF
KAKVHPAQTSNQLSTDQVADLRQATIEVLQLGIEKGGSTIRTYKNALGMDGTMQDYLQVY
GKTGQACPRCQTEIVKIQLGGRGTHFCPKCQVKHG
NT seq 828 nt NT seq  +upstreamnt  +downstreamnt
ttgcccgaattgcctgaggttgagacggttcgtcgtggtttgaatcgtttggtcaaggga
aaagttatttccaaggtggaggtgacctatgctcccatgattaagacaggtgtggatgcc
ttctgccaagacttgattggtcaggagattttagatgtggaccgtcgtggcaagtatctc
ttgatttacctgacagaccatgtcctcatttctcatttgcggatggaaggtaagtacaat
ttctttgctgaccaggtgcctgccaacaaacatttccatgccttttttacttttatagat
ggctcgaccttggtctatcaagatgtccgcaagtttgggaccatggaactgctgggtaag
gcagatgtggatgcctattttatcagtcgaaaaattggtcctgagccgacggaggaagat
tttgacttagaagaatttgccaaaaagttagctaagtcgaaaaagcccattaagtcgcat
cttttggaccagtctttggtggctggtttgggcaatatttatgtcgatgaggtcttgttc
aaggccaaagttcatcctgcacaaacgagtaatcagctgtcgacagatcaggtggcagac
ctccgtcaagccaccattgaagtcctgcaactgggtattgaaaaaggtggttcaaccatt
cggacttacaaaaatgccttgggcatggatgggactatgcaggattatttacaagtttac
ggaaagacagggcaggcctgtccccgttgccagacagagattgtcaaaatccagctgggc
ggacgggggacacatttctgtcccaagtgtcaggtgaaacatggctaa

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