KEGG T00412: Acid

Candidatus Solibacter usitatus: Acid_5307

Entry

Acid_5307 CDS T00412

Gene name

kgd

Definition

alpha-ketoglutarate decarboxylase (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

sus Candidatus Solibacter usitatus

Pathway

sus00020	Citrate cycle (TCA cycle)
sus00310	Lysine degradation
sus00380	Tryptophan metabolism
sus01100	Metabolic pathways
sus01110	Biosynthesis of secondary metabolites
sus01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:sus00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:sus00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:sus00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh 2-oxoacid_dh HTH_29

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

6647460..6651122

AA seq 1220 aa
MSAKPGSEMGVNSWLEDELYQQYLHDRSAVDESWKQVFAEPRPGNGVKAAAPAIPALAPS
VTPAEGEQLQPLRGIAGKIAENMGASLSIPLATSQRTIAVKVMDENRRIINQHRTLVGQG
KVSYTHLIGWAVVKALEEIPGINHAYTERDGQPFRVMHPEINLGIAVDVAGKDGGRTLMV
PNIKNAGGLSFQEYVTAFDDLVSRARKGKLLPADFQGTTISLTNPGTVGTMASIPRLMPG
QGAIIATGAIDYPAEYQGAADETRAMLGISKVMTLTCAYDHRIIQGAESGAFLGRLQSLL
DGKDGFYEEVFNHLRMPHMPVRWETDRKPTLPGVSAARYAEIAKEAGIIQMINAYRVRGH
LIADLDPLGSEPSLHAELDPETYGLTIWDLDREFLTGSLGEAIGEGAPKSLATLREILET
LRQTYCGKIGCEYMNIQVPEQKRWLQQRMEPEANNWLLDRETRLRTLHSVIAGEEFEHFL
HSRFVGQKRFALEGGETALAILEEILERAAGRNVHEIVVGMAHRGRLNILANTVGKDVKQ
IFSEFEGEIDPGSTQGSGDVKYHLGATGMRRTSNGREIVVSVSPNPSHLEAVDPVVEGIV
RPKQDRLGDTERERVIPVLIHGDAAFAGQGVVTETLNLSQLEGYSTGGTIHLIINNQIGF
TTLPDESRSTPYSTDVARGVQAPIFHVNGDDPEAAIRVVQIAFDYRQQFKTDVVIDMICY
RRHGHNEGDDPSYTQPILYRKIKEHPSVATLYGRRLVREGVLSVEEVQGMQKEVAARLST
AYDAVQERAERFELQELSAVQGEEIGGYCPRTSVNQQVLERVIRAITQFPESFHLHPKLR
GFVEKRRDVVAKGGNLDWAFGEALAFGTLALEGTPVRLSGQDSGRGTFSQRHLVFYDSET
GKRYVPMQHISPDQGKFDVLDSSLSEYAVLGFEFGYSVADPLSLVIWEAQFGDFANGAQI
MIDQFISCCEQKWGQPSGLVMLLPHGYEGQGPEHSSARIERYLTLCAENNMQVCNCTTPA
QYFHLLRRQMYGGSDRRGMRKPLVIFTPKSLLRHQKAVSTLHDFTTGGFTEILSGAGVAD
NGLVSRVVFCSGKIYYDLLAAREERKADHVAIIRVEQLYPFAADQARDILARYAPTAEVV
WAQEEPRNMGAWRFIRECLQAVLDDSRREIRYVGRPESASPATGSGKRHQQEQAEIVNDA
LTPGAISQTRRVRVVARRKK

NT seq 3663 nt +upstreamnt +downstreamnt
atgtctgcgaaacctggttcagaaatgggcgtcaacagctggctcgaagatgagctatat
caacagtatctgcacgatcgttcggcggtcgacgagagttggaaacaggtcttcgccgag
ccgagaccgggcaacggggtcaaagcagccgcgcccgctatacctgccctggcgccgtcc
gtgacacccgcggagggagagcagttgcagcccctgcgcgggatcgccggcaagatcgcc
gagaacatgggcgccagcctctcaatcccgctggcgacttcgcagcgcaccatcgccgtc
aaagtgatggacgagaaccggcgcatcatcaaccagcaccggacgttggtaggacaaggc
aaggtctcctacacgcacctcatcgggtgggcggtcgtgaaggcgctcgaagagattccc
gggatcaatcacgcctacaccgagcgcgatggccagccattccgggtgatgcatccggaa
atcaacctgggaatcgcggtggacgtggccggcaaagacggcgggcgcaccctgatggtc
cccaacatcaagaacgccggcggactcagcttccaggaatacgtaaccgcgttcgacgac
ctggtgtcgcgcgcccgcaagggcaaactgctgccggcggattttcagggcaccacgatt
tcgttgaccaatccgggcacggtcggcaccatggcgtccatcccgcggctcatgcccggg
cagggcgcgatcatcgctaccggtgcgatcgattatccggcggagtaccagggcgctgcc
gacgaaacgcgcgccatgctgggcattagcaaggtcatgacgcttacgtgcgcgtacgat
caccgcattattcagggcgcggaatcgggcgcatttctgggcagattgcaatcgcttctc
gatggcaaagacgggttctacgaggaggtcttcaaccacctgcgcatgccgcacatgccg
gtgcgctgggaaaccgaccgcaagccgacgctgccaggcgtaagcgccgcgcgatatgcc
gagatcgccaaggaagccggcattatccagatgatcaacgcgtaccgtgtgcgcggccac
ctgatcgcggatctggacccgctcgggagcgagccgagcctgcatgccgagttggacccg
gagacgtacgggctgaccatttgggacctggatcgcgaattcctgaccggcagcctgggc
gaggcgatcggcgaaggcgcgccgaaatccttggccaccctgcgtgagattctggagacg
ctgcgccagacgtactgcggcaaaatcggctgcgagtacatgaacattcaggtgccggag
cagaagcgctggctgcagcagcgcatggagccggaggccaacaactggctgctggatcgc
gagacgcggctgcgcacgctgcactccgtgatcgcgggcgaggagttcgagcatttcctg
cattcccggttcgtcgggcagaagcggttcgcgctcgagggcggagagaccgcgctcgct
atcctggaggagattctggaacgcgccgcggggcgcaacgtgcacgagatcgtggtaggc
atggcacatcgcggccgcctgaatattctggccaacacggtcggcaaggacgtgaagcag
atcttcagcgagttcgaaggcgagatcgacccgggcagcacgcagggctcgggcgacgtg
aagtatcacctgggtgccacgggcatgcgccggacttccaacggccgcgagatcgttgtc
tcggtgtcgccgaatccaagccatctggaggcggtcgatccggtggtagagggcatcgtg
cgtcccaagcaggaccggctcggcgataccgagcgcgagcgcgtgatcccggttctgatc
cacggcgacgccgccttcgcgggtcaaggcgtggtgacggaaacgttgaatctctcgcag
ctcgaaggctactcgaccggcggcacgatccacctgatcatcaacaaccagatcggcttc
accacgctgcccgatgaatcgcggtccaccccgtattccaccgacgtggcgcgcggagtg
caagcgcccattttccacgtgaacggagacgatcccgaggccgccatccgggtggtgcag
atcgcgttcgattatcggcagcagttcaaaaccgacgtagtcatcgacatgatctgctat
cgccgccatggccacaatgaaggcgacgacccgagctacacgcagccgattctgtatcgc
aagattaaggagcatccttctgtcgcaacgctctacgggaggcggctggtgcgcgagggc
gtgctctccgtggaagaagtccagggcatgcagaaggaagtggcggcgcgcctttcgacc
gcgtacgacgccgtgcaggagcgcgccgagcgcttcgagctgcaggaattgagcgccgtc
cagggcgaagagatcggcggatattgtccgcgcaccagcgtgaaccagcaggtgctggag
cgcgtgatccgcgccattacgcaattcccggagagcttccacttgcatcccaagctgcgc
ggcttcgtggagaagcgccgcgacgtagtcgccaagggcggcaacctggattgggccttc
ggcgaagcgctggccttcggcacgctggcgctcgagggcacgccggtgcggctcagcggc
caggattcggggcgcggcaccttcagccagcggcatctcgtgttctacgattcggaaacc
ggcaaacggtacgtgccgatgcagcacatctcgcccgaccagggcaaattcgacgtgctg
gacagttcgttgagcgagtacgcggtgctcggctttgaattcggctacagcgtggcggat
ccgctttcgctggtgatatgggaggcgcagttcggtgatttcgccaatggcgcgcagatc
atgatcgatcagttcatcagctgctgcgaacagaagtggggccagcccagcggccttgtt
atgctgctgccgcacgggtatgaaggccagggtccggagcactccagcgcgcgcatcgag
cgctacctgacgttgtgcgccgagaacaacatgcaggtctgcaactgtacgacgcccgcg
cagtatttccacctgctgcggcgccagatgtacggcggcagcgaccgccgcggcatgcgc
aagccgctcgtcatcttcacgccgaagagcctgctgcgccatcagaaggccgtctcgacg
ctgcacgatttcaccaccggcggatttaccgagatcctgagtggcgcgggcgtggcggat
aacgggctggtgtcgcgcgtggtcttctgcagcggcaaaatttactacgacctgctggcc
gcgcgcgaggaacgcaaggccgaccatgtggccatcatccgcgtggagcagctctatccg
tttgccgccgaccaggcgcgcgacattctggcgcgctacgcgccgacagccgaggtggtg
tgggcccaggaagagccgcgcaacatgggagcgtggcgcttcatccgcgagtgcctgcag
gcggtgctcgacgattcgcggcgcgaaatccgctacgtcggccgccccgagagcgccagc
ccggcgacgggcagcggcaaacgccaccagcaggagcaggcggagatcgtcaacgatgct
ctcacccccggcgcgatctcgcagaccaggcgtgtcagagtagtggcgcgaaggaagaag
tag

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SUS (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (36)   

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