KEGG T00412: Acid

Candidatus Solibacter usitatus: Acid_6821

Entry

Acid_6821 CDS T00412

Definition

ATP dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

sus Candidatus Solibacter usitatus

Pathway

sus03410	Base excision repair
sus03420	Nucleotide excision repair
sus03430	Mismatch repair
sus03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:sus03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:sus03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:sus03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:sus03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(8552284..8553252)

AA seq 322 aa
MPPPTSRVRFIEPMLLRRTEHLPEGDGVSYELKLDGFRAIAYKTGGKVHLRSRNDKDFNA
KYPVIVKALAHMPDETVIDGEIVALDGVGRPSFSALQNYGFSTGPLLYYAFDVMVIAGED
VMALPLEDRRELLRSRVLAKLADPIRESPELVATLPQLIQSVKAQGLEGPIAKRRDSRYE
AGQRSGAWQKMRMNQGQDFVIAGYTPSGNGFDALIFGYYDGDRLIYVARTRNGFTPASRE
KLFRRFRGLETVQCPFANLLEAKVGRWGVGLTAEKMNECKWLRPELVGQFEFLEITPDNH
LRHSRFIGLREDKKAREVERDG

NT seq 969 nt +upstreamnt +downstreamnt
atgccaccccccacaagtagagtccggttcatcgagccgatgctgctacgacgaaccgag
cacctcccggagggtgacggcgtttcctacgagctgaaactggatggcttccgcgccatc
gcctacaagaccggcggcaaggtccacctccgctcccgcaacgacaaggacttcaacgcc
aagtaccccgtcatcgtgaaggccctcgcgcacatgcccgatgaaaccgtgatcgacggg
gagatcgtggccctggatggggttggccgtccttcgttcagcgccctgcagaactacggc
ttctccacggggccgctcttgtactacgcattcgacgtgatggtgatcgcgggggaggac
gtgatggcgctgccactggaggaccgcagggagcttctgcggagccgcgtgctggcgaag
ctggccgatcccatccgcgagtcaccggagttggtcgccactctgccgcagctgattcag
tcggtgaaggcccagggcctggaagggccgatcgccaagcgccgggatagccgctatgag
gccgggcagcgctccggcgcatggcagaagatgcgcatgaaccaggggcaggatttcgtc
atcgccgggtacacgcccagcggcaacggctttgacgccctgattttcggatactacgac
ggggaccggctaatctacgtggcccgaacccgcaacggcttcactccggcatcgcgagag
aagctgttcaggaggtttagagggctggagacggtgcagtgccctttcgctaatctgctg
gaagccaaggtcggaaggtggggcgtgggtcttactgcggagaagatgaatgagtgcaag
tggcttaggccggagctggtggggcagtttgaattcctggagatcacgcctgacaatcac
ctgcgccattcccgtttcattgggctgcgggaggacaagaaggcgcgggaggtggaacgt
gacggctag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SUS (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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