KEGG   Staphylococcus aureus subsp. aureus VC40: SAVC_01975
Entry
SAVC_01975        CDS       T01745                                 
Name
(GenBank) DNA polymerase III subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
suv  Staphylococcus aureus subsp. aureus VC40
Pathway
suv03030  DNA replication
suv03430  Mismatch repair
suv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:suv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SAVC_01975
   03430 Mismatch repair
    SAVC_01975
   03440 Homologous recombination
    SAVC_01975
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:suv03032]
    SAVC_01975
   03400 DNA repair and recombination proteins [BR:suv03400]
    SAVC_01975
Enzymes [BR:suv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SAVC_01975
DNA replication proteins [BR:suv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SAVC_01975
DNA repair and recombination proteins [BR:suv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SAVC_01975
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA RuvB_N AAA_30 DNA_pol3_gamma3 AAA_5 AAA_19 TIP49 AAA_22 AAA_16 AAA_14 PIF1 Mg_chelatase AAA_assoc_2 AAA_18 TniB ResIII AAA_7 nSTAND3 AAA_24 T2SSE TsaE RNA_helicase DASH_Dad2
Other DBs
NCBI-ProteinID: AEZ36561
Position
445258..446955
AA seq 565 aa
MNYQALYRMYRPQSFEDVVGQEHVTKTLRNAISKEKQSHAYIFSGPRGTGKTSIAKVFAK
AINCLNSTDGEPCNECHICKGITQGTNSDVIEIDAASNNGVDEIRNIRDKVKYAPSESKY
KVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTEPHKIPPTIISRAQRFDFKAISL
DQIVERLKFVADAQQIECEDEALAFIAKASEGGMRDALSIMDQAIAFGDGTLTLQDALNV
TGSVHDEALDHLFDDIVQGDVQASFKKYHQFITEGKEVNRLINDMIYFVRDTIMNKTSEK
DTEYRALMNLELDMLYQMIDLINDTLVSIRFSVNQNVHFEVLLVKLAEQIKGQPQVIANV
AEPAQIASSPNTDVLLQRMEQLEQELKTLKAQGVSVAPVQKSSKKPARGIQKSKNAFSMQ
QIAKVLDKANKADIKLLKDHWQEVIDHAKNNDKKSLVSLLQNSEPVAASEDHVLVKFEEE
IHCEIVNKDDEKRSSIESVVCNIVNKNVKVVGVPSDQWQRVRTEYLQNRKNEGDDMPKQQ
AQQTDIAQKAKDLFGEETVHVIDEE
NT seq 1698 nt   +upstreamnt  +downstreamnt
ttgaattatcaagccttatatcgtatgtacagaccccaaagtttcgaggatgtcgtcgga
caagaacatgtcacgaagacattgcgcaatgcgatttcgaaagaaaaacagtcgcatgct
tatatttttagtggtccgagaggtacggggaaaacgagtattgccaaagtgtttgctaaa
gcaatcaactgtctaaatagcactgatggagaaccttgtaatgaatgtcatatttgtaaa
ggcattacgcaggggactaattcagatgtgatagaaattgatgctgctagtaataatggc
gttgatgaaataagaaatattagagacaaagttaaatatgcaccaagtgaatcgaaatat
aaagtttatattatagatgaggtgcacatgctaacaacaggtgcttttaatgccctttta
aagacgttagaagaacctccagcacacgctatttttatattggcaacgacagaaccacat
aaaatccctccaacaatcatttctagggcacaacgttttgattttaaagcaattagccta
gatcaaattgttgaacgtttaaaatttgtagcagatgcacaacaaattgaatgtgaagat
gaagccttggcatttatcgctaaagcgtctgaagggggtatgcgtgatgcattaagtatt
atggatcaggctattgcatttggtgatggtacgttaacattgcaagatgcgttgaatgtc
acaggtagcgtacatgatgaagcgttggatcacttgtttgatgatattgtacaaggtgac
gtacaagcatcttttaaaaaataccatcagtttataacagaaggtaaagaagtgaatcgc
ctaataaatgatatgatttattttgtcagagatacgattatgaataaaacatctgagaaa
gatactgagtatcgagcactgatgaacttagaattagatatgttatatcaaatgattgat
cttattaatgatacattagtgtcgattcgttttagtgtgaatcaaaacgttcattttgaa
gtgttgttagtaaaattagctgagcagattaagggtcaaccacaagtgattgcgaatgta
gctgaaccagcacaaattgcttcatcgccaaacacagatgtattgttgcaacgtatggaa
cagttagagcaagaactaaaaacactaaaagcacaaggagtgagtgtcgctcctgttcaa
aaatcttcgaaaaagcctgcgagaggcatacaaaaatctaaaaatgcattttcaatgcaa
caaattgcaaaagtgctagataaagcgaataaggcagatatcaaattgttgaaagatcat
tggcaagaagtgattgatcatgccaaaaataatgataaaaaatcactcgttagtttattg
caaaattcggaacctgtggcggcaagtgaagatcacgtacttgtgaaatttgaggaagag
atccattgtgaaatcgtcaataaagacgacgagaaacgtagtagtatagaaagtgttgta
tgtaatatcgttaataaaaacgttaaagttgttggtgtaccatcagatcaatggcaaaga
gttcgaacggaatatttacaaaatcgtaaaaacgaaggcgatgatatgccaaagcaacaa
gcacaacaaacagatattgctcaaaaagcaaaagatcttttcggtgaagaaactgtacat
gtgatagatgaagagtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (24)   
   Pfam (24)   
All databases (36)   

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