KEGG   Staphylococcus aureus subsp. aureus HO 5096 0412 (MRSA): SAEMRSA15_04100
Entry
SAEMRSA15_04100   CDS       T02059                                 
Symbol
holB
Name
(GenBank) putative DNA polymerase III, delta' subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
sux  Staphylococcus aureus subsp. aureus HO 5096 0412 (MRSA)
Pathway
sux03030  DNA replication
sux03430  Mismatch repair
sux03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sux00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SAEMRSA15_04100 (holB)
   03430 Mismatch repair
    SAEMRSA15_04100 (holB)
   03440 Homologous recombination
    SAEMRSA15_04100 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sux03032]
    SAEMRSA15_04100 (holB)
   03400 DNA repair and recombination proteins [BR:sux03400]
    SAEMRSA15_04100 (holB)
Enzymes [BR:sux01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SAEMRSA15_04100 (holB)
DNA replication proteins [BR:sux03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SAEMRSA15_04100 (holB)
DNA repair and recombination proteins [BR:sux03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SAEMRSA15_04100 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNApol3-delta_C DNA_pol3_gamma3
Other DBs
NCBI-ProteinID: CCG15128
Position
482985..483911
AA seq 308 aa
MDEQQQLTNAYHSNKLSHAYLFEGDDAQTMKQVAINFAKLILCQTDSQCETKVSTYNHPD
FMYISTTENAIKKEQVEQLVRHMNQLPIESTNKVYIIEDFEKLTVQGENSILKFLEEPPD
NTIAILLSTKPEQILDTIHSRCQHVYFKPIDKEKFINRLVEQNMSKPVAEMISTYTTQID
NAMALNEEFDLLALRKSVIRWCELLLTNKPMALIGIIDLLKQAKNKKLQSLTIAAVNGFF
EDIIHTKVNVEDKQIYSDLKNDIDQYAQKLSFNQLILMFDQLTEAHKKLNQNVNPTLVFE
QIVIKGVS
NT seq 927 nt   +upstreamnt  +downstreamnt
atggatgaacagcaacaattgacgaatgcatatcattcaaataaattatcgcatgcctat
ttatttgaaggtgatgatgcacaaacgatgaaacaagttgcgattaattttgcaaagctt
attttatgtcaaacagatagtcaatgtgaaacaaaggttagtacatataatcatccagac
tttatgtatatatcaacaactgagaatgcaattaagaaagaacaagttgaacaacttgtg
cgtcatatgaatcaacttcctatagaaagcacaaataaagtgtacatcattgaagacttt
gaaaagttaactgttcaaggggaaaacagtatcttgaaatttcttgaagaaccaccggac
aatacgattgctattttattgtctacaaaacctgagcaaattttagacacaatccattca
aggtgtcagcatgtatatttcaagcctattgataaagaaaagtttataaatagattagtt
gaacaaaacatgtctaagccagtagctgaaatgattagtacttatactacgcaaatagat
aatgcaatggctttaaatgaagaatttgatttattagcattaaggaaatcagttatacgt
tggtgtgaattgttgcttactaataagccaatggcacttataggtattattgatttattg
aaacaggctaaaaataaaaaactgcaatctttaactattgcagctgtgaatggtttcttc
gaagatatcatacatacaaaggtaaatgtagaggataaacaaatatatagtgatttaaaa
aatgatattgatcaatatgcgcaaaagttgtcgtttaatcaattaattttgatgtttgat
caactgacggaagcacataagaaattgaatcaaaatgtaaatccaacgcttgtatttgaa
caaatcgtaattaagggtgtgagttag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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